Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0702 ATGCCACCGCTGCCGGCGTTCGATACTAACCCTCCGCCATTGCTGGAACCAGCAGCACCGCCAACATTCAGTTCTCCGCCATCACCTTCATCGGCTATCTCGCCAATGGCTTTAGCACCTCCACATAACTCGCCGGCGGCTTCAGTTCCGACGGCGCCACTCCCTTCAACTTCAGCACCTCCGGCTATTTCAGTCTCTCCGGTGTCGTCCCCTCCGTCTCCTCACATTTCACTCACTTCAGCTCCTCCTCCTCCGATTACGTCTGATGACACAACAAATCCACCATTATCATCCCCTCCATCTCCTCCAACGTTACTCCTCCCGGCCCGGCCTTTGCCGTCACCGGTGGTGTCTTCAGCATCCCAGCCACCACCATTTCAGTTGCCCTCGGCACCTGAAACAGTGATTTTCCCACCGCCTGCTCCTATGTCTTCGACAGTCACTTTTCCACCACCTTCAACGCCTGCATTACCAACGATGTCTCCGGTACCGCAAATTACTTCTTCGCCACCTCCGGTGACCTCATTTCCGCCGATTTTTTCTACACTGCCTCCCCCTGTGCCTATTCTTCCATTTACAAACATGGTACCCCCTACTTCATCCTCGGCAATACCATCAAATCCCACACTTCCGGCATTGCCAACGGCACCGGAGACCCAGCCGTCTTCATCAGAAAATTCAAGCATGAATTCGGAAGGGCAGCCTCCAGCGGCGTCATCGGCCGGAGTTTTGCCGTTGGCGGTGGAAGTTCAGAAGCCTCCAATCTTCAATATCTCAACTGGGCTCATAATTGGGCTTGTTATTGGTGGAGCTATCCTTATGTTTGTTCTTGCCATTGCGTTAGTTCTGTGTGCCCGTCGTAGGCATCGGAGGAAAAAGAAGCGTGATCTTCTTGAACCAGCATATAATGTAGGATCAAGAGGGTCGCATGTTATTCAAGTGGAAGCAAATCCAATGGTGCCACCATATCTTAGACAGGAAGGTGGAGCTTCTGGCTCTGTTATATCAGTGCCTGAGAATCCAATTCGAAACCATGCTCCAACCATGGCCTTCAGTTCTGCGAATGGTAATTTCACATATGAGGACCTATTAGCAGCTACTAGTGGTTTCTCAGAGACCAACCTTCTCGGTGAAGGTGGCTTTGGTTATGTATACCTAGGAGTTCTTCCAAGTGGAAAAGAAATTGCAGTTAAGAAGCTAAAATCAGGAAGTCATCAAGGAGAGCGAGAATTTCAAGCAGAGGTTGAGACAATTAGTCGGGTGCATCATAAACATCTTGTTGAATTGTTTGGATACTGTGTTACCGGGACTGATAGATTGCTTGTTTATGAATTCCTTCCAAATAGCACTTTGGAATCCCACTTACATGGTGAAGGGAAGCCTGTCGTAGAGTGGGCAACCAGAATGAAAATAGCCCTTGGGTCAGCAAGAGGGGTGGCATATCTGCACGAAGATTGTACCCCAGCAATCATTCACCGTGATATTAAGGCATCTAATATTCTTCTTGATTTTAAGTTTGAGGCCAAGGTTTCTGACTTTGGTCTGGCCAAGATCTTTCCTGAAACCGATAGTGGGGTTACTCACCTCACCACCAGAGTTGTGGGAACCTTTGGGTATCTGGCCCCAGAGTATGCATCCAGTGGTAAATTAACAGATAAATCAGATGTATATTCTTTTGGAGTCATGCTTCTAGAACTTATAACCGGACGTCCACCTATCACTACAACTCAATCTTCAAGGAATCTCAGCCTGGTTGATTGGGCTAGGCCTTTGCTAGCTCAAGCCATTCAAGACGGTGAGTACAGCAATCTTGTTGATCCGAGGTTGCAGAAAAATTACAGTAACGATGAGATGCCCAGAATGATTACCTGTGCAGCTGCTTGTGTGCGCCATTCAGCCAAGCTTCGACCGCGTATGAGCCAAATAGTAGGTGCTCTAGAAGGACTGGTTTCTCTGACCGATTTTGTTGAAGACATTACACCGGGATATACCAAATTATGCAGTTGGTCAGGAAGTTCAAATTATGATGCCAACAAATACCAGGACATGACAAATTTCAACTTGGTATTATCGAGTCAAAAGTACAGCTTTAGTTGGTGTAGTGAAAGCACAAGCGCCTATGGTCTTCACCCATCAGATTCAAGTAGTGAGATCAGCAAACAAATCAAGACATAA 2175 0.4768 MPPLPAFDTNPPPLLEPAAPPTFSSPPSPSSAISPMALAPPHNSPAASVPTAPLPSTSAPPAISVSPVSSPPSPHISLTSAPPPPITSDDTTNPPLSSPPSPPTLLLPARPLPSPVVSSASQPPPFQLPSAPETVIFPPPAPMSSTVTFPPPSTPALPTMSPVPQITSSPPPVTSFPPIFSTLPPPVPILPFTNMVPPTSSSAIPSNPTLPALPTAPETQPSSSENSSMNSEGQPPAASSAGVLPLAVEVQKPPIFNISTGLIIGLVIGGAILMFVLAIALVLCARRRHRRKKKRDLLEPAYNVGSRGSHVIQVEANPMVPPYLRQEGGASGSVISVPENPIRNHAPTMAFSSANGNFTYEDLLAATSGFSETNLLGEGGFGYVYLGVLPSGKEIAVKKLKSGSHQGEREFQAEVETISRVHHKHLVELFGYCVTGTDRLLVYEFLPNSTLESHLHGEGKPVVEWATRMKIALGSARGVAYLHEDCTPAIIHRDIKASNILLDFKFEAKVSDFGLAKIFPETDSGVTHLTTRVVGTFGYLAPEYASSGKLTDKSDVYSFGVMLLELITGRPPITTTQSSRNLSLVDWARPLLAQAIQDGEYSNLVDPRLQKNYSNDEMPRMITCAAACVRHSAKLRPRMSQIVGALEGLVSLTDFVEDITPGYTKLCSWSGSSNYDANKYQDMTNFNLVLSSQKYSFSWCSESTSAYGLHPSDSSSEISKQIKT 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0702 724 FunFam proline-rich receptor-like protein kinase PERK8 446 661 - -
Dere04g0702 724 ProSitePatterns Protein kinases ATP-binding region signature. 376 399 IPR017441 GO:0005524
Dere04g0702 724 MobiDBLite consensus disorder prediction 1 28 - -
Dere04g0702 724 FunFam Proline-rich receptor-like protein kinase PERK8 342 445 - -
Dere04g0702 724 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 271 675 IPR047117 -
Dere04g0702 724 MobiDBLite consensus disorder prediction 200 239 - -
Dere04g0702 724 MobiDBLite consensus disorder prediction 705 724 - -
Dere04g0702 724 CDD STKc_IRAK 376 649 - -
Dere04g0702 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Dere04g0702 724 MobiDBLite consensus disorder prediction 76 110 - -
Dere04g0702 724 SUPERFAMILY Protein kinase-like (PK-like) 344 646 IPR011009 -
Dere04g0702 724 Gene3D Transferase(Phosphotransferase) domain 1 446 658 - -
Dere04g0702 724 SMART serkin_6 370 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0702 724 MobiDBLite consensus disorder prediction 1 152 - -
Dere04g0702 724 MobiDBLite consensus disorder prediction 117 152 - -
Dere04g0702 724 Pfam Protein kinase domain 371 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0702 724 MobiDBLite consensus disorder prediction 49 75 - -
Dere04g0702 724 ProSiteProfiles Protein kinase domain profile. 370 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0702 724 MobiDBLite consensus disorder prediction 216 237 - -
Dere04g0702 724 Gene3D Phosphorylase Kinase; domain 1 335 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0702 Dere-ChrDere04 6992320 6996810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0702 303 724 Trihelix Transcription Factor Family AT4G32710 57.110 5.51e-145 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dere04g0702 Pkinase 1.7e-45 CL0016