Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0695 ATGGAGGAGGTCGTGGAGTTCGCGTGGATTGCACGCTGTTTTTGGCGGGGACAAAAGAGTCAAAAGACGTTGTGGCGTAGCTGCAAACGAATACTTGGTGAAGGAACCCAGATATACCCTGGAAGAGAGGGTTTCATTATGTCTATGGCAGCAGTGGAATTCAAAAATATGGAAAGGGAACGAACCCGGAAACGACCTCGTCTCACGTGGGATGAAGCCCCATACTCTGAGCCAGAGGCGCAAAGGGCTCTTGTGGTGGGTGATGAAGGATTCCACAACAGGCATGCATCGCCTCCAAGAAGGGTTGACGATCGTGATGGCCATTACGTGTTTAATCTTGGCGAGAATCTCACGCCTAGATATAAAATCCTCAGCAAGATGGGTGAAGGCACATTTGGTCGAGTTTTGGAATGTTGGGACCGCCAAACCCGAGAATATGTGGCCATCAAGGTAGTTAGAAGCATACCAAAATACCGTGATGCAGCAATGATTGAGGTTGATGTGCTTCAACGTCTAGCTAAGAATGAGAGAGACAGTTCACGTTGCGTACATATCAGGAACTGGTTTGATTACCGGAATCACATATGTATTGTATTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGGGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGACCTCCGCCTAATCCACACTGACCTGAAGCCAGAAAATATACTTCTGGTTTCTTCTGAATACGTAAAGCTCCCTAGCTGTAAGAGGTTTTCCTCAGATGAAATGCAATTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCATTTGATAATCAGAACCATAGCTCCATTGTTTCTACAAGGCATTACCGAGCCCCTGAGATTATTCTAGGTCTAGGGTGGTCATATCCATGTGATTTGTGGAGTGTTGGATGTATTCTCATTGAACTTATTTCGGGCAAAGCGTTGTTTCAGACTCATGAAAACTTGGAGCACCTGGCAATGATGGAGAGAGTGTTGGGACCTCTGCCCGAGCAGATGGCTCGAAGGTCTAACCGAGGTGCTGAAAAGTATTTCAGGCATGGATCACGACTGAATTGGCCCGAAGGAGCTGTTTCAAGGGAGAGTATTCGAGCAGTAAAGAAGCTTGATCATCTAAAGGAACTTGTATCGCGGCAAGTGGAGTCTTCAAGATCCTCTTTAACTGACTTGTTATATGGCTTATTGGCCTATGATCCGGCTGAACGCCTAACAGCTCTCCAAGCCCTTGATCATCCTTTCTTTAAGAATCCAACTTAA 1353 0.4531 MEEVVEFAWIARCFWRGQKSQKTLWRSCKRILGEGTQIYPGREGFIMSMAAVEFKNMERERTRKRPRLTWDEAPYSEPEAQRALVVGDEGFHNRHASPPRRVDDRDGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTREYVAIKVVRSIPKYRDAAMIEVDVLQRLAKNERDSSRCVHIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYVKLPSCKRFSSDEMQFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSVGCILIELISGKALFQTHENLEHLAMMERVLGPLPEQMARRSNRGAEKYFRHGSRLNWPEGAVSRESIRAVKKLDHLKELVSRQVESSRSSLTDLLYGLLAYDPAERLTALQALDHPFFKNPT 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0695 450 SUPERFAMILY Protein kinase-like (PK-like) 108 448 IPR011009 -
Dere04g0695 450 CDD PKc_CLK 108 446 - -
Dere04g0695 450 FunFam Serine/threonine-protein kinase AFC2 197 446 - -
Dere04g0695 450 Gene3D Phosphorylase Kinase; domain 1 108 201 - -
Dere04g0695 450 Gene3D Transferase(Phosphotransferase) domain 1 175 446 - -
Dere04g0695 450 FunFam Serine/threonine-protein kinase AFC2 108 201 - -
Dere04g0695 450 ProSiteProfiles Protein kinase domain profile. 121 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0695 450 SMART serkin_6 121 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0695 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Dere04g0695 450 Pfam Protein kinase domain 121 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0695 450 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 78 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0695 Dere-ChrDere04 6881976 6886965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0695 120 448 Core Cell Cycle Gene Families AT3G54180 28.653 1.65e-27 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Dere04g0695 Pkinase 4.2e-51 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0695 04 6881976 6886965 Dere04g0695 04 6881976 6886965 ECH