Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0691 ATGCAAAAGGAGAAGGAAGCAAGCAAAGAGGGGAGGGAGATGGAGATGGAGATGAGTGGAGGAAAAGAGGAAACCCTACCACCGGGATTTCGATTCCATCCTTCAGATGAAGAACTTATCACTTACTATCTCATAAACAAGATCTCGGATTCTAATTTTACAGGAAAAGCAATTGCTGATGTAGATCTCAATAAATGCGAGCCATGGGAGCTCCCAGGGAAGGCGAAGATGGGAGAGAAAGAGTGGTACTTCTTCAGCCTGAGAGATCGCAAGTACCCGACGGGGGTGAGAACCAACAGAGCTACCAACACTGGCTACTGGAAAACCACCGGCAAAGACAAAGAAATCGTCAATTCTGCCACGTCGGAGCTTCTTGGCATGAAGAAGACTCTGGTTTTCTACAAAGGCAGAGCCCCAAGAGGCGAGAAAACCAACTGGGTCATGCACGAATACCGCATTCACTCCAAATCCTCCAAGCAAGATGAATGGGTGGTATGCCGGGTGTTCCAGAAGAGTGGGGGTGTGAAGAAGTACCCTTCGAACCATACAAGAGGAGTGAATCCTTATAGCCTGGAAATAGGTGGTGGTGGTGGTGGTACTACTACTAGCATTATGCCACCACCTATGAATATGATGCAGCTCGGAGATGCAGCTGCTCATTTCCTTTATGGAAGGAACAGTAATTACATGATGAGTGGTGTATCAGCCAATACTGCTCTCAGCCTTCCAATGCAATCCCACTTCAACTATCCCGTAGCACCACATGGAGGCTTCACTATTTCAGGCTTAAATTTGAATCTGGGAGGTGCAGGAGCACCCACATCACAACCCTTTTTGCGACCAATCAGTAATCAACACGATGTTGTCGGATCTAACATGATGACACCTGGCACTTGTCTTGGTGAGGACAATATAGGAGGATATGGTACTGAGATAAGCAACAACGTTAACGTTAACGTCAATCCTCAGTTTCAGAGCAATAGGTATGTGGGCATGGACCATTGCGTGGATCTCGATACTTATTGGCCTTCCTACTAA 1038 0.4682 MQKEKEASKEGREMEMEMSGGKEETLPPGFRFHPSDEELITYYLINKISDSNFTGKAIADVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIVNSATSELLGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSSKQDEWVVCRVFQKSGGVKKYPSNHTRGVNPYSLEIGGGGGGTTTSIMPPPMNMMQLGDAAAHFLYGRNSNYMMSGVSANTALSLPMQSHFNYPVAPHGGFTISGLNLNLGGAGAPTSQPFLRPISNQHDVVGSNMMTPGTCLGEDNIGGYGTEISNNVNVNVNPQFQSNRYVGMDHCVDLDTYWPSY 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0691 345 SUPERFAMILY NAC domain 16 171 IPR036093 GO:0003677|GO:0006355
Dere04g0691 345 ProSiteProfiles NAC domain profile. 26 171 IPR003441 GO:0003677|GO:0006355
Dere04g0691 345 MobiDBLite consensus disorder prediction 1 20 - -
Dere04g0691 345 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 205 - -
Dere04g0691 345 MobiDBLite consensus disorder prediction 1 29 - -
Dere04g0691 345 Gene3D NAC domain 35 174 IPR036093 GO:0003677|GO:0006355
Dere04g0691 345 FunFam NAC domain-containing protein 100-like 35 175 - -
Dere04g0691 345 Pfam No apical meristem (NAM) protein 27 153 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0691 Dere-ChrDere04 6854657 6856447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0691 22 345 NAC Transcription Factor Family AT2G24430 52.786 4.21e-105 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere04g0691 NAM 1.6e-40 No_clan