Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0687 ATGGAGGCGAAACCTACCGGCGTCTTGTCTCCGTGCACCACGAGTCAATCTCAATCTCTGCCCGCGTCGTCGATCTTCTCCGTCGGCGGTGACTTCAAACGGACGCCATCGGAGTTCGACCTTGAAGAGTTACTGAAGAAGGCGGTGGGATCGGCGAACGACGAGGACGTGAAACCGAGCGAGCTTTGGTGTCCAAGAGACAAAAGTTTCGCCGAGACGGACGCATTTCTCAACTCCGATGACCTTGTCGCCCCTTTCCGAAATTCGGATGCAGTGACTGGATTTTCAACTTGTGAGGGGCTAACAGATACCATTATTTGGTCCCAAAACACTACTCCCAAGCATTCACCTCTCTGCGCTACGACTGAATCTCAGTCATCCATTTGTGGTACTGTTTGCAGCCCAGTGTCAGCTAATCAACTGAGTCCAAACGGCAGAGACAATCAAACAAAAGGAACTACTAGTGCTTCCTCACGCGAGCAATCTGATGAGGATGACGCAGCAGGTCCTTGTGAACAGAGCACAAACCCTATTGATATGAAGCGCCTTAGAAGGAAGGTTTCCAATCGGGAGTCTGCCAGGAGATCAAGAAGAAGAAAACAAGCTCATTTGGCTGACCTTGAGTTGCAGGTTGAACAACTGAGACTGGAAAATGCAGCCCTGTATAGGCAGCTTACAGATGCTAGTCAGCAATTTCGTGAGGCTGATACAAATAACCGGGTGCTGAAATCAGATGTCGAAGCTTTGAGAGCCAAGGTGAAGTTAGCTGAAGATATGGTGACTAGGGGCTCCTTCACCACTTTAAACAACCAGCTTCTTCAGAATCAGAGTCAGCTAAACTCACAGCCACAACTTAACACCACTGGCCTGCATATGGCACATGTCTCGCCAACCATCACTGTCCATGGAAATGATGCCTCATATGCTAGTATTGCAGTTGATGGTCACAATTCTTCTCTTGGACCTGGAAACTTAGATATCAGTAATAACAATTTCGACACTGGAGTTATAAGTGATGCTATGAGCTGTGTCACTGAAATATTTCTGTGA 1050 0.479 MEAKPTGVLSPCTTSQSQSLPASSIFSVGGDFKRTPSEFDLEELLKKAVGSANDEDVKPSELWCPRDKSFAETDAFLNSDDLVAPFRNSDAVTGFSTCEGLTDTIIWSQNTTPKHSPLCATTESQSSICGTVCSPVSANQLSPNGRDNQTKGTTSASSREQSDEDDAAGPCEQSTNPIDMKRLRRKVSNRESARRSRRRKQAHLADLELQVEQLRLENAALYRQLTDASQQFREADTNNRVLKSDVEALRAKVKLAEDMVTRGSFTTLNNQLLQNQSQLNSQPQLNTTGLHMAHVSPTITVHGNDASYASIAVDGHNSSLGPGNLDISNNNFDTGVISDAMSCVTEIFL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0687 349 Coils Coil 349 349 - -
Dere04g0687 349 CDD bZIP_plant_GBF1 182 233 IPR045314 GO:0003700|GO:0006355
Dere04g0687 349 Coils Coil 239 259 - -
Dere04g0687 349 SMART brlzneu 177 241 IPR004827 GO:0003700|GO:0006355
Dere04g0687 349 Pfam bZIP transcription factor 180 227 IPR004827 GO:0003700|GO:0006355
Dere04g0687 349 Coils Coil 190 231 - -
Dere04g0687 349 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 184 199 IPR004827 GO:0003700|GO:0006355
Dere04g0687 349 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 179 242 IPR004827 GO:0003700|GO:0006355
Dere04g0687 349 FunFam BZIP transcription factor 179 230 - -
Dere04g0687 349 PANTHER BASIC LEUCINE ZIPPER 63 19 326 - -
Dere04g0687 349 Gene3D - 180 236 - -
Dere04g0687 349 MobiDBLite consensus disorder prediction 137 157 - -
Dere04g0687 349 MobiDBLite consensus disorder prediction 137 201 - -
Dere04g0687 349 SUPERFAMILY Leucine zipper domain 181 231 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0687 Dere-ChrDere04 6811336 6814596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0687 97 348 bZIP Transcription Factor Family AT5G24800 48.450 1.03e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere04g0687 bZIP_1 1.2e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0687 04 6811336 6814596 Dere04g0687 04 6811336 6814596 ECH