Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0686 ATGTGGCAGGACAAAGAGAAGAAGAACATCCTAGCAGTACAGTCACTGAGGAACACAATCATGGGATCGACTCTAATGGCGACAACCTCGGTGCTGCTGTGCACTGGACTAGCATCAGTGATAACCAGCACCTACAGTTTGAAGAAGCCACTGAACGACACACTGTACGGTGCTTACGGCGAGTTCATGGTAGCACTCAAATACGTCACACTCCTCACCTTCTTCCTCTTCTCCTTCTTCTGCCACACTCTGTCCATATGGTTCATCAACCAAGTCAACATGCTCATTAACACCCCACAGGGTCACACCATCTTACATCAACAACATATTAGTGAGAGGTTTCGTTTTGAACACTGTGGGAAACTGGCTCTTCTATGCTGCACTTCCTCTCTTGCTCTGGATTTTCGGGCCTGTCATGGTGTTCCTGTGCTCTCTTACTATGGTTCCTGTGCTTTACAACCTCGACTTTGTATGCTCTTCCCCTGCCGAGCCAAAGATGGACGTCGATCAAAATGGCGACTTCGTTTGAAGCTCATCTGCTCACTCTGTGTGTTATCAAATATAAACCTGAAAACATCGGTCTTCTCTCTCAGATCTATCGGGGGGCCTTTCTGGACTCTCAGACTACGCAAATCGAGCTTTGTTCTTCATACGCCCAACAATCTCTCCTTTGCTACGAGCTATTCTCCTCTTGTTTCTGCCTTTGCTCTTCAGAAGTTTGTCCAAGCAGTAACTATGTCTTCATCATATCTTCCTGCAACAACGGAGACAGTTGCACAAGCACTGGAGGCTAAAAACCCATCTGAGGCAATCTCCATTCTTTATGGTGTACTTGAGAACCCTTCTTCATCTCCAGAAGCTCTGCGCATTAAAGAGCAGGCCATTACAAACCTCTCTGACCTTCTTAGGCAAGAGAATAGGGCAGAGGATCTTCGGAGCCTTCTCACTCAGTTGAGGCCATTTTTTTCATTGATCCCTAAGGCAAAAACTGCAAAAATCGTGAGGGGAATAATTGATTCTGTTGCTAAAATACCAGGGACTTCTGATCTGCAAATTGCGCTCTGTAAAGAGATGGTGCAGTGGACTCGTGCTGAAAAGCGTACCTTTTTGAGGCAGCGGGTTGAGGCAAGGCTTGCAGCTCTTCTGATGGAAAATAAGGAGTATGCGGAAGCTTTGACTCTTCTTACTGGCTTGGTCAAAGAGGTTAGAAGGTTGGATGACAAGCTTCTTCTTGTAGACATAGACTTGCTGGAAAGCAAGCTACACTTCTCCTTAAGAAACCTTCCAAAGGCAAAAGCTGCCCTCACGGCAGCAAGAACAGCTGCTAATGCTATTTATGTGCCCCCTGCTCAACAAGGTGCCATAGATTTGCAAAGTGGGATTCTTCACGCAGAGGAAAAGGATTATAAAACTGCATATAGTTATTTCTTTGAAGCTTTCGAGTCTTTTAATGCTCTCGAAGACCCCAAGGCTGTTTTTAGCCTGAAATACATGTTATTGTGTAAGATTATGGTGAGTCAAGCTGATGATGTGGCAGGCATCATATCTTCTAAAGCAGGCCTACAATATGTTGGGCCTGACTTGGATGCGATGAAAGTTGTTGCAGACGCTCATTCTAAACGATCTCTAAAGTTATTTGAAATTGCTTTGCGGGACTACAAGGCACAGTTGGAAGAAGACCCAATTGTCCACAGGCACCTCTCGTCCCTTTATGATACCCTTCTGGAGCAGAACCTTTGCAGATTAATTGAGCCATTCTCAAGGGTCGAGATTGTGCATATTGCTGAGCTAATTGAACTTCCCATTGATAATGTGGAGCGGAAGTTGTCTCAGATGATTTTAGACAAGAAGTTTGCTGGGACATTGGATCAAGGTGCTGGATGCCTTGTCATATTTGATGATCCCAAGAGTGATGCCATCTATCCTGCAACCTTGGAAACCATTTCGAACATTGGGAAAGTTGTGGACAGCCTTTATGTTAGGTCTGCCAAGATAATGGCATGA 2004 0.4511 MWQDKEKKNILAVQSLRNTIMGSTLMATTSVLLCTGLASVITSTYSLKKPLNDTLYGAYGEFMVALKYVTLLTFFLFSFFCHTLSIWFINQVNMLINTPQGHTILHQQHISERFRFEHCGKLALLCCTSSLALDFRACHGVPVLSYYGSCALQPRLCMLFPCRAKDGRRSKWRLRLKLICSLCVLSNINLKTSVFSLRSIGGPFWTLRLRKSSFVLHTPNNLSFATSYSPLVSAFALQKFVQAVTMSSSYLPATTETVAQALEAKNPSEAISILYGVLENPSSSPEALRIKEQAITNLSDLLRQENRAEDLRSLLTQLRPFFSLIPKAKTAKIVRGIIDSVAKIPGTSDLQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMENKEYAEALTLLTGLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALEDPKAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPDLDAMKVVADAHSKRSLKLFEIALRDYKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIVHIAELIELPIDNVERKLSQMILDKKFAGTLDQGAGCLVIFDDPKSDAIYPATLETISNIGKVVDSLYVRSAKIMA 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0686 667 Pfam Protein of unknown function, DUF599 1 105 IPR006747 -
Dere04g0686 667 Coils Coil 371 391 - -
Dere04g0686 667 FunFam 26S proteasome non-ATPase regulatory subunit 11 291 666 - -
Dere04g0686 667 SUPERFAMILY "Winged helix" DNA-binding domain 559 641 IPR036390 -
Dere04g0686 667 Coils Coil 291 311 - -
Dere04g0686 667 SMART PCI/PINT associated module 388 564 - -
Dere04g0686 667 Pfam 26S proteasome regulatory subunit RPN6 N-terminal domain 259 373 IPR040773 -
Dere04g0686 667 Pfam PCI domain 530 631 IPR000717 -
Dere04g0686 667 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 565 648 IPR000717 -
Dere04g0686 667 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 280 663 - -
Dere04g0686 667 SUPERFAMILY TPR-like 374 568 IPR011990 GO:0005515
Dere04g0686 667 ProSiteProfiles PCI domain profile. 468 636 IPR000717 -
Dere04g0686 667 Gene3D - 291 666 - -
Dere04g0686 667 Pfam 26S proteasome subunit RPN6 C-terminal helix domain 638 663 IPR040780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0686 Dere-ChrDere04 6790826 6796713 Dispersed/Wgd