Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0674 ATGAAAAGGTTGGGAAGGTTGACACATCCTAATCTACTCCCCCTCGTCGCATTCTGCTACAGAGAAGAGAAGCTTCTGGTCTATGACTTTGTTGAAAATGGCAGCTTGGCTAGTCATCTCCATGGTCGGATTGATTCTAATTTGGACTGGCCAACTCGATTGAAGATAATAAAAGGAGTAGCGAGGGGGTTTCCGGAGCGTTTGAGAAGATAA 213 0.4507 MKRLGRLTHPNLLPLVAFCYREEKLLVYDFVENGSLASHLHGRIDSNLDWPTRLKIIKGVARGFPERLRR 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0674 70 Gene3D Transferase(Phosphotransferase) domain 1 1 65 - -
Dere04g0674 70 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 63 IPR046959 -
Dere04g0674 70 Pfam Protein tyrosine and serine/threonine kinase 3 64 IPR001245 GO:0004672|GO:0006468
Dere04g0674 70 SUPERFAMILY Protein kinase-like (PK-like) 3 63 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0674 Dere-ChrDere04 6679100 6679582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0674 1 64 Receptor kinase-like Gene Family AT1G50610 69.231 1.34e-24 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere04g0674 PK_Tyr_Ser-Thr 3.8e-07 CL0016