Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0665 ATGGTGTCAGGGTCAGGGATCTGCGCAAAGAGGGTGGTGGTCGACGTTAGTCACCACATGTTGGGCCGTTTGGCCTCAATAGTGGCCAAGGAGCTCCTTAATGGACAGAAGGTGGCCGTGGTGAGTTGTGAGGAGATTTGCATCTCTGGTGGCCTCGTGAGGCAGAAGATGAAGTACATAAGAAAGGACAGTGCTAAAGGTCCGAAACAAGCTAGTGAGAGGCCGGTGAGGCTCGTGGGGTCCCGATCGTCCACCAGTGGTCTTTTAATGACGGCCTTTGAAAATGAGTATAAGCTTCAAATGGTTGGTAGAGACGTTATACACCTCAGTGCCAACTTTAAAGATGTGGTCAGGGAAACCATCATACTAGAGCAATAG 378 0.5026 MVSGSGICAKRVVVDVSHHMLGRLASIVAKELLNGQKVAVVSCEEICISGGLVRQKMKYIRKDSAKGPKQASERPVRLVGSRSSTSGLLMTAFENEYKLQMVGRDVIHLSANFKDVVRETIILEQ 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0665 125 Gene3D Ribosomal protein L13 8 81 IPR036899 GO:0003735|GO:0005840|GO:0006412
Dere04g0665 125 Pfam Ribosomal protein L13 10 71 IPR005822 GO:0003735|GO:0005840|GO:0006412
Dere04g0665 125 SUPERFAMILY Ribosomal protein L13 12 75 IPR036899 GO:0003735|GO:0005840|GO:0006412
Dere04g0665 125 PANTHER RIBOSOMAL PROTEIN L13 1 71 IPR005822 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0665 Dere-ChrDere04 6631293 6635559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0665 1 61 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 85.246 1.18e-32 112