Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0664 ATGGCGGTGGACCTCATGGGGTTCCCAAAATTGGACGAGCAGAAGGCAATACAGGAGGCTGCATCGGAAGGCTTGAAGGGCATGGAGCACATGATCCGTCTCCTCTCCCATCAACCCAATCACGTCGACTGCACCGACCTCACCGATGTAACCGTTTCTAAGTTCAAGAAATTCATTTCCCTCCTCAACCGGACCGGTCACGCCCGCTTCAGGCGAGCACCCATTGCCTCCTCTTCGTCGTCGTCTCCGTCTACTTCTACCTCGCCGCCGCCGCAGCGACCATCTGCAGCCGTAACGCCCTCCGTCTCAATTTCTCAATCGCATTCTCTGAACCTATCTCCGGCACAGTTCACCTCTCCAGCTCGAATGGCAAATCCGGTCACCGTGCATCACGCGCCTTCTAGTTTCGTCTCGGCTCAGGCTCCGCTGAGTTTGACTCTTGATTTTACAAAGCCTAACATCTTAGGCTCCAACACCAAATCCCTAGAGCTGGAGTTCCCGAAGGAAACCTTCAGCGTCTCGTCAAACTCGTCGTTTATGTCATCCGCCATTACCGGAGACGGCAGCGTTTCGAACGGCAAGCAAGGATCGTCCATCTTCCTGACTCCGGCGGCACCAACGGTTTCAGGCGGAAAGCCACCTCTGTCGACGGGGCCGCTCAAGAAAAGATGCCATGATCACCGGGACCACTCCGACGATGCCTCCGGTTCCAGCAAGTGCCACTGCGTGAAGAGAAGGAAAAATCGGGTGAAGAAGACGGTGAGGGTGCCGGCGATAAGTTCGAAGATAGCGGATATTCCAGCGGACGAGTATTCGTGGAGGAAGTACGGTCAGAAGCCGATCAAGGGGTCACCGTACCCACGGGGGTATTACAAGTGTAGCACAGTGAGAGGGTGCCCCGCGAGGAAACACGTGGAGAGGGCGACAGATGATCCGACGATGCTGGTCGTGACGTACGAGGGGGAGCACCGTCATGTAATGCAGGGTGCGATGCAGGAGAACGTAGCCGGGAGTGTGGGTTTGGTATTCGAGTCAACGTGA 1041 0.562 MAVDLMGFPKLDEQKAIQEAASEGLKGMEHMIRLLSHQPNHVDCTDLTDVTVSKFKKFISLLNRTGHARFRRAPIASSSSSSPSTSTSPPPQRPSAAVTPSVSISQSHSLNLSPAQFTSPARMANPVTVHHAPSSFVSAQAPLSLTLDFTKPNILGSNTKSLELEFPKETFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLTPAAPTVSGGKPPLSTGPLKKRCHDHRDHSDDASGSSKCHCVKRRKNRVKKTVRVPAISSKIADIPADEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPTMLVVTYEGEHRHVMQGAMQENVAGSVGLVFEST 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0664 346 SMART WRKY_cls 267 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g0664 346 Pfam WRKY DNA -binding domain 269 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g0664 346 Gene3D WRKY domain 250 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g0664 346 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 328 IPR044810 GO:0003700
Dere04g0664 346 MobiDBLite consensus disorder prediction 72 105 - -
Dere04g0664 346 MobiDBLite consensus disorder prediction 188 204 - -
Dere04g0664 346 Pfam Plant zinc cluster domain 221 265 IPR018872 -
Dere04g0664 346 FunFam WRKY transcription factor 65 251 328 - -
Dere04g0664 346 SUPERFAMILY WRKY DNA-binding domain 265 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g0664 346 ProSiteProfiles WRKY domain profile. 262 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g0664 346 MobiDBLite consensus disorder prediction 188 242 - -
Dere04g0664 346 MobiDBLite consensus disorder prediction 219 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0664 Dere-ChrDere04 6606545 6608094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0664 1 345 WRKY Transcription Factor Family AT2G24570 60.504 7.42e-123 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere04g0664 WRKY 9e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0664 04 6606545 6608094 Dere04g0664 04 6606545 6608094 ECH