Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere04g0664 | ATGGCGGTGGACCTCATGGGGTTCCCAAAATTGGACGAGCAGAAGGCAATACAGGAGGCTGCATCGGAAGGCTTGAAGGGCATGGAGCACATGATCCGTCTCCTCTCCCATCAACCCAATCACGTCGACTGCACCGACCTCACCGATGTAACCGTTTCTAAGTTCAAGAAATTCATTTCCCTCCTCAACCGGACCGGTCACGCCCGCTTCAGGCGAGCACCCATTGCCTCCTCTTCGTCGTCGTCTCCGTCTACTTCTACCTCGCCGCCGCCGCAGCGACCATCTGCAGCCGTAACGCCCTCCGTCTCAATTTCTCAATCGCATTCTCTGAACCTATCTCCGGCACAGTTCACCTCTCCAGCTCGAATGGCAAATCCGGTCACCGTGCATCACGCGCCTTCTAGTTTCGTCTCGGCTCAGGCTCCGCTGAGTTTGACTCTTGATTTTACAAAGCCTAACATCTTAGGCTCCAACACCAAATCCCTAGAGCTGGAGTTCCCGAAGGAAACCTTCAGCGTCTCGTCAAACTCGTCGTTTATGTCATCCGCCATTACCGGAGACGGCAGCGTTTCGAACGGCAAGCAAGGATCGTCCATCTTCCTGACTCCGGCGGCACCAACGGTTTCAGGCGGAAAGCCACCTCTGTCGACGGGGCCGCTCAAGAAAAGATGCCATGATCACCGGGACCACTCCGACGATGCCTCCGGTTCCAGCAAGTGCCACTGCGTGAAGAGAAGGAAAAATCGGGTGAAGAAGACGGTGAGGGTGCCGGCGATAAGTTCGAAGATAGCGGATATTCCAGCGGACGAGTATTCGTGGAGGAAGTACGGTCAGAAGCCGATCAAGGGGTCACCGTACCCACGGGGGTATTACAAGTGTAGCACAGTGAGAGGGTGCCCCGCGAGGAAACACGTGGAGAGGGCGACAGATGATCCGACGATGCTGGTCGTGACGTACGAGGGGGAGCACCGTCATGTAATGCAGGGTGCGATGCAGGAGAACGTAGCCGGGAGTGTGGGTTTGGTATTCGAGTCAACGTGA | 1041 | 0.562 | MAVDLMGFPKLDEQKAIQEAASEGLKGMEHMIRLLSHQPNHVDCTDLTDVTVSKFKKFISLLNRTGHARFRRAPIASSSSSSPSTSTSPPPQRPSAAVTPSVSISQSHSLNLSPAQFTSPARMANPVTVHHAPSSFVSAQAPLSLTLDFTKPNILGSNTKSLELEFPKETFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLTPAAPTVSGGKPPLSTGPLKKRCHDHRDHSDDASGSSKCHCVKRRKNRVKKTVRVPAISSKIADIPADEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPTMLVVTYEGEHRHVMQGAMQENVAGSVGLVFEST | 346 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere04g0664 | 346 | SMART | WRKY_cls | 267 | 327 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dere04g0664 | 346 | Pfam | WRKY DNA -binding domain | 269 | 325 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dere04g0664 | 346 | Gene3D | WRKY domain | 250 | 327 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Dere04g0664 | 346 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 15 | 328 | IPR044810 | GO:0003700 | |
Dere04g0664 | 346 | MobiDBLite | consensus disorder prediction | 72 | 105 | - | - | |
Dere04g0664 | 346 | MobiDBLite | consensus disorder prediction | 188 | 204 | - | - | |
Dere04g0664 | 346 | Pfam | Plant zinc cluster domain | 221 | 265 | IPR018872 | - | |
Dere04g0664 | 346 | FunFam | WRKY transcription factor 65 | 251 | 328 | - | - | |
Dere04g0664 | 346 | SUPERFAMILY | WRKY DNA-binding domain | 265 | 326 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Dere04g0664 | 346 | ProSiteProfiles | WRKY domain profile. | 262 | 328 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dere04g0664 | 346 | MobiDBLite | consensus disorder prediction | 188 | 242 | - | - | |
Dere04g0664 | 346 | MobiDBLite | consensus disorder prediction | 219 | 240 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere04g0664 | Dere-ChrDere04 | 6606545 | 6608094 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere04g0664 | 1 | 345 | WRKY Transcription Factor Family | AT2G24570 | 60.504 | 7.42e-123 | 354 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Dere04g0664 | WRKY | 9e-26 | CL0274 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dere04g0664 | 04 | 6606545 | 6608094 | Dere04g0664 | 04 | 6606545 | 6608094 | ECH |