Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0654 ATGCTCTCTGTTCTTCTCCCCCCTACGTCTTGCTCTTCCTGTTTCAATCAACCTCAGTCTCTCTCTCAATCTCTCTCTGCCTTTTCTCCCCCATATTTTGGTGTTTATCCTGTCGTCTCTCCACTCTTCAATGTTTCCCTGTGCTCAATTTTTCTCTCTCTTGAGGAGTACTGTGTTCTCGACGTCTTCCTCTCTTTCTTCACTCTGTGTTTTTTAGCGATAACTTTTGGAAAAGTTGAAAACTTTAAAAAACTCCTGAAACCATTGGCCCAACCTGAATCATTTACATCCCCGAAACCAAAGATAAAAACAAAGTGCTGGCTTTACGCTCTTCACTCCAGCGGCAGCGAGCATCGAGACAGAGAAGAAGATCAAAGGGGTCAGTTTCATCCAAATATTGTCACAGAAAGAATGGAGCTTTCTCCCCCTTCTTCTGTGATCGCGCAGCAAACATGGGAGCTGGAGAACAACATCATCCCCATGGACACTCCCACTACCAGCGCCGACCAAGCCTCCGATGCCATCTTCTACTACGACGAGGCCGCCCAGACCGAATTTCAGAGAAACAAGCCTTGGGTGAACGATCCTCACTACTTCAAGCGTGTTAAGATCTCCGCTCTTGCCCTTCTCAAGATGGTTGTCCACGCTCGCTCTGGTGGCAACATTGAGGTCATGGGTCTTATGCAAGGCAAGACCGACGGCGATGCCATCATCGTCATGGACGCCTTCGCTTTGCCCGTTGAAGGCACAGAGACTCGTGTTAATGCCCAAGCCGATGCCTACGAATATATGGTTGATTATTCTCAGACTAATAAGCAGGCTGGGCGTCTGGAAAATGTTGTTGGATGGTATCATTCTCACCCTGGTTATGGATGCTGGCTCTCGGGTATTGACGTGTCTACGCAAATGCTAAATCAACAATTTCAAGAGCCTTTTCTGGCTGTTGTTATTGACCCAACAAGGACGGTTTCTGCTGGAAAAGTTGATATTGGGGCATTCAGGACATACCCAGAAGGTTATAAGCCGCCAGATGATCCTGTCTCTGAGTACCAAACCATCCCGTTAAATAAGATTGAAGACTTTGGTGTTCACTGTAAACAGTACTATGCATTGGACATCACTTACTTTAAGTCTTCTCTTGATTCACATCTCTTGGATCTTCTATGGAACAAATATTGGGTGAATACACTATCATCTTCTCCTTTATTGGGTAACGGCGATTACGTAGCTGGGCAAATCTCAGATCTAGCTGAAAAGCTAGAACAAGCAGAAAATCAGTTGGCACACCCACGCTTTGGGTCAATAATAGGTCCCCCTCAGAAAAAGAAAGGAGAAGAATCTCCACTTGCCAAGATTACTCGTGATAGTGCAAAAATTACTGTGGAGCAAGTACATGGTCTGATGTCACAGGTCATCAAAGACATCCTCTTCAACTCCGTGCGGCAAGCAAACAAATCTGGTGCTGAAGCATCTGGCCCTGAACCAATGATTGAAAGTTGA 1500 0.458 MLSVLLPPTSCSSCFNQPQSLSQSLSAFSPPYFGVYPVVSPLFNVSLCSIFLSLEEYCVLDVFLSFFTLCFLAITFGKVENFKKLLKPLAQPESFTSPKPKIKTKCWLYALHSSGSEHRDREEDQRGQFHPNIVTERMELSPPSSVIAQQTWELENNIIPMDTPTTSADQASDAIFYYDEAAQTEFQRNKPWVNDPHYFKRVKISALALLKMVVHARSGGNIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVDIGAFRTYPEGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHPRFGSIIGPPQKKKGEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQANKSGAEASGPEPMIES 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0654 499 CDD MPN_RPN11_CSN5 191 463 - -
Dere04g0654 499 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 189 486 - -
Dere04g0654 499 Pfam Cop9 signalosome subunit 5 C-terminal domain 398 478 IPR040961 -
Dere04g0654 499 SUPERFAMILY JAB1/MPN domain 201 338 - -
Dere04g0654 499 SMART pad1_6 201 338 IPR000555 GO:0005515|GO:0008233|GO:0008237
Dere04g0654 499 ProSiteProfiles MPN domain profile. 202 339 IPR037518 -
Dere04g0654 499 Gene3D Cytidine Deaminase, domain 2 142 404 - -
Dere04g0654 499 FunFam COP9 signalosome complex subunit 5 143 404 - -
Dere04g0654 499 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 199 310 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0654 Dere-ChrDere04 6517722 6524156 Dispersed/Wgd