Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0624 ATGGGGGTGGATTACTACGACGTATTGAAGGTTGATAAAAATGCGACAGATGATGATCTGAAGAAATCATATAGAAAGTTGGCCATGAAATGGCATCCTGACAAGAACCCCAACCACAAAAAAGAAGCTGAAGCCAAATTCAAGCAGATCTCTGAAGCCTACGAGGTACTAAGCGACCCTCATAAAAGGGTGATTTATGATCAGCATGGAGAGGAAGGGTTGAAAGATATGCCACCCCCTGGGAATGGACCATCAAGTGGGTTTAATCCCAGAAACGCAGAGGATATTTTTGCAGAATTCTTTGGAAGTAGCCCTTTTGGATTTGGATCATCTGGACCCGGCAGGTCCACGAGGTACCAGTCCGAAGGAGCAGGAATATACGGTGGTTTTGGTGGAGGTGACAACATTTTTCGTACATACAATGAAGGCAAGCAAATGCCAAAAAAGCCACCAGCTGTGGAGAGCAAATTGCCTTGCAGCCTGGAGGAGTTATACTCTGGATCCACAAGGAAAATGAAGATCTCGAGGACTATTGATGCCAATGGACGGCGAGTCACAGAAACAGAGATATTAACCATTGATGTAAAACCTGGGTGGAAGAAAGGGACGAAGATTACCTTCCCAGATAAAGGGAATCAACAACCAAATCAACTCCCAGCTGACCTTGTATTTGTGATTGATGAAAAGCCTCATGATTTGTACAAGAGAGATAGCAATGACCTGATTGTGAGCCAAACGGTGTCACTACCAGAGGCTATCGGAGGAACAACAGTAAATCTCACCACACTAGATGGGCGGAGTCTATCAATTCCAGTGACTGACATTGTGAGCCCTGGTTACGAGCTTCTTGTTGCAAAGGAAGGAATGCCGATAGCCAAGGAGCCTGGGAATAGGGGTGATTTGAAGATCAGATTTGAGGTGAAGTTCCCTACAAAGTTGACGCCAGAGCAACGAGCAGGGCTCAAACGTGCTTTGGGAGGTTGA 984 0.4573 MGVDYYDVLKVDKNATDDDLKKSYRKLAMKWHPDKNPNHKKEAEAKFKQISEAYEVLSDPHKRVIYDQHGEEGLKDMPPPGNGPSSGFNPRNAEDIFAEFFGSSPFGFGSSGPGRSTRYQSEGAGIYGGFGGGDNIFRTYNEGKQMPKKPPAVESKLPCSLEELYSGSTRKMKISRTIDANGRRVTETEILTIDVKPGWKKGTKITFPDKGNQQPNQLPADLVFVIDEKPHDLYKRDSNDLIVSQTVSLPEAIGGTTVNLTTLDGRSLSIPVTDIVSPGYELLVAKEGMPIAKEPGNRGDLKIRFEVKFPTKLTPEQRAGLKRALGG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0624 327 SUPERFAMILY Chaperone J-domain 3 110 IPR036869 -
Dere04g0624 327 PRINTS DnaJ domain signature 42 62 IPR001623 -
Dere04g0624 327 PRINTS DnaJ domain signature 62 81 IPR001623 -
Dere04g0624 327 PRINTS DnaJ domain signature 24 39 IPR001623 -
Dere04g0624 327 PRINTS DnaJ domain signature 6 24 IPR001623 -
Dere04g0624 327 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Dere04g0624 327 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 325 - -
Dere04g0624 327 FunFam Dnaj homolog subfamily b member 148 229 - -
Dere04g0624 327 CDD DnaJ 4 59 IPR001623 -
Dere04g0624 327 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Dere04g0624 327 Gene3D - 151 229 - -
Dere04g0624 327 Pfam DnaJ C terminal domain 153 310 IPR002939 -
Dere04g0624 327 SMART dnaj_3 3 62 IPR001623 -
Dere04g0624 327 Pfam DnaJ domain 4 67 IPR001623 -
Dere04g0624 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 154 232 IPR008971 GO:0006457|GO:0051082
Dere04g0624 327 Gene3D DnaJ domain 3 111 IPR036869 -
Dere04g0624 327 Gene3D - 230 326 - -
Dere04g0624 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 234 319 IPR008971 GO:0006457|GO:0051082
Dere04g0624 327 CDD DnaJ_C 153 313 - -
Dere04g0624 327 FunFam DNAJ heat shock family protein 230 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0624 Dere-ChrDere04 6241802 6244237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0624 5 114 C2H2 Transcription Factor Family AT1G74250 37.391 2.16e-11 62.8