Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0605 ATGGCCGTGCTGGTAATGGCTCAGCATAACAATGGCAACAATAGTGCTAGCCAACAGTTAGTGAAGCCTGTCTTCCATGATTTTCTGGGCATGAAGCCCACTGATTCCCTGGTCGTTTTGGCCCCCAAAACCGCCGACGTGAGGCTGTCGGAGGCGTCGCCATCGTCGGCATCGGTGTCCGTTGCCGCCACTTCTGGAGGTGCCCGTGGTCCCTTTTCAACCACATCTGATATCGGCTCCGAAAGACAGGTAGGAAATCATCTCGAGGGAGTTCCATTCTATGGCCCGAGGAGTGATTTTTCTGACACTGGGCCAAGCAACAGACTAGTAGGAAACAAGAGAAGTAACTCTGAGTCTACTTTCATGGGTTCCTCCCGAGATGCCTTCCAAATGGTCCCTGACTCCATTCAAAACTCACATTTGATGAAGATGCTCCGAAGTACAGCCGTGGGAGAGCAGCATAGAAGGTCCAATGATGATGAAGTGTTTCTTGGTATGCAGCCACTGAAGCCGACATCGGCTTCTAAGATATTTCAGCCCCCTACCGGAACTAAGATTGATTCCAATAAATGGGAGCGATCTGTAATAATGACTGCTGGCCCTTCAATGCAGCATCCACAACGTGGGGCTCAATTAACACCTTTTGTGCACCAGATAGCTTCAAACAAGATCCGGGATACCAATATTGGTCCTTCATTTATCTCTCAGTTAGCTGCTGATGAAGGATCTAGAACTGGAATCAAGGGCCCTGGAATTTTGAGTTCTATGAACACAGCAACTGTTGCCTCTGAGAAAACTTCGTCTGCTGTGCTGCTTAGCGGAGGCAGGCCAAAGCCTGTGTCTAATATAATAGACTTAGAATCTTCCACACCCTCGAGACGACATGAATCAAGATCTGCCAGCTGTCAGATGACTATTTTCTATGGAGGTCAAGCTCATGTGTTTGATGATGTCCACCCCAATAAGGCAGATGTTATAATGAGCTTAGCAGGTTCAAATGGTGGAAGTTGGTCCACAACCACAACATGCTCACCCAAACCTCCCGCAAAGCTGCTTCATGAAACTGCGGAAATTGAAACTGGGAAGCTTCATGCCATTCCCTCTGCTGATCGCATATCAACACCATCAGGGGCACTTCAGGGAAACGTTGTGGCTAAAGATACGAGAAATCCAGTTCAGGCAGCGGATCCATCTTCTCAAGGCAAAAGAGCGCAATAA 1218 0.4828 MAVLVMAQHNNGNNSASQQLVKPVFHDFLGMKPTDSLVVLAPKTADVRLSEASPSSASVSVAATSGGARGPFSTTSDIGSERQVGNHLEGVPFYGPRSDFSDTGPSNRLVGNKRSNSESTFMGSSRDAFQMVPDSIQNSHLMKMLRSTAVGEQHRRSNDDEVFLGMQPLKPTSASKIFQPPTGTKIDSNKWERSVIMTAGPSMQHPQRGAQLTPFVHQIASNKIRDTNIGPSFISQLAADEGSRTGIKGPGILSSMNTATVASEKTSSAVLLSGGRPKPVSNIIDLESSTPSRRHESRSASCQMTIFYGGQAHVFDDVHPNKADVIMSLAGSNGGSWSTTTTCSPKPPAKLLHETAEIETGKLHAIPSADRISTPSGALQGNVVAKDTRNPVQAADPSSQGKRAQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0605 405 MobiDBLite consensus disorder prediction 369 405 - -
Dere04g0605 405 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 102 364 IPR040390 -
Dere04g0605 405 MobiDBLite consensus disorder prediction 373 405 - -
Dere04g0605 405 MobiDBLite consensus disorder prediction 100 122 - -
Dere04g0605 405 MobiDBLite consensus disorder prediction 49 122 - -
Dere04g0605 405 Pfam tify domain 300 331 IPR010399 -
Dere04g0605 405 ProSiteProfiles Tify domain profile. 297 332 IPR010399 -
Dere04g0605 405 SMART tify_2 297 332 IPR010399 -
Dere04g0605 405 MobiDBLite consensus disorder prediction 49 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0605 Dere-ChrDere04 6042942 6047083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0605 5 330 Tify Gene Family AT4G32570 40.176 2.39e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dere04g0605 tify 7.1e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2117 05 31269546 31275146 Dere04g0605 04 6042942 6047083 CCT