Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0581 ATGGAGGAGGCTGCAGTTGCTACAAATGTGAATTCAACCATAGGATCAGAAATTGGATTGAATTTACAGCGTTTTGCTTCCTTACAATCTGCTGGTATCCAAGATAAAAGGCCTCTTTCTTATGAAAATTTTGGGAATTCTCACGAACCCATCCAACCAACAAGCCAAATCTTTTGGAATTCTCAGCAAATCAACCAACCAAGAAGCCCACAAAAGAGAAGGCAGAAGATATCAAGCAACTCTGGCGGTGTTACTCGTAAACCATGCAATTGCAAGAGGAGTCAGTGTATAAAACTTTACTGTGATTGTTTTGCTTCTGGTGAATTCTGTGGTGAGCATTGTGCTTGCCGATGCTGTTTTAATAGAAAAGAACATGAGAATACTGTTGCAGAGATAAGGAATCAAGTTAAATGTCGTAAACCATATGCATTCGAATCTATGATTACTCGTGTCGATCATGGGACATCATCATCTCTCAGACACAAAAGAGATCATGGTGTTGTTGAAGTTGCAGAGAGTCAAAGAAGACTTGAAATAGTATCAGATAGCAAACCGTACCATAACATGGGAATGGTGACAGACCAGAGAGATTCGTTTCATGAGATGAACCATTTCACACCAGCATTGCAATTTTCAAAGTAA 642 0.3941 MEEAAVATNVNSTIGSEIGLNLQRFASLQSAGIQDKRPLSYENFGNSHEPIQPTSQIFWNSQQINQPRSPQKRRQKISSNSGGVTRKPCNCKRSQCIKLYCDCFASGEFCGEHCACRCCFNRKEHENTVAEIRNQVKCRKPYAFESMITRVDHGTSSSLRHKRDHGVVEVAESQRRLEIVSDSKPYHNMGMVTDQRDSFHEMNHFTPALQFSK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0581 213 ProSiteProfiles CRC domain profile. 85 213 IPR005172 -
Dere04g0581 213 MobiDBLite consensus disorder prediction 63 86 - -
Dere04g0581 213 SMART CXC_2 84 125 IPR033467 -
Dere04g0581 213 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 58 163 IPR044522 GO:0003700
Dere04g0581 213 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 87 122 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0581 Dere-ChrDere04 5801326 5802939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0581 1 163 CPP Transcription Factor Family AT4G14770 33.523 3.05e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Dere04g0581 TCR 4.7e-11 No_clan