Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0574 ATGCCGAAATCCATTCAGCCATTTTCTATATCGTTCTGGCCCAGGTCGTGGGGGTCAAAAATGCAGGAGCAAGCAACAAGTTCCATTGCCGCAAGCTCTCTCCCTTCGAGCAGTGAAAAATCTTCAAGTTCTGCTCTCCAGCATGAAGTTAAGGAAGGCATTGAGAGTGACGAGGAGATCAGAAGGGTGCCGGAGATCGGGGTTGAAACTGTCGGAACGTCAGCTTCTCGTCCAGACGCCGGTTCAGGTGCAGGTCAAGACCGGGTTCAAGGGGCAGGGGAGGGTCAAAGGAAGCGAGGGAGAAACCCAGCTGACAAAGAAAGCAAGCGGCTAAAGAGGCTACTGCGGAACAGAGTTTCAGCACAGCAAGCAAGGGAGAGGAAGAAGGCGTACTTGATTGATTTGGAAACTAGAGTTAAAGACTTGGAGAAGAAGAATTCGGAGCTGGAAGAGAGGCTGTCCACTTTACAGAACGAGAATCAGATGCTAAGACATATATTGAAGAACACAACAGCAAGCAGGAGAGGAGGCAGTGGTGCAGGTGCCAATGCTGAAGGGGCTTTCCGTTTGAGACGCAAGCCGGGGATACCGGACAGCCTGGCGGACCAAGCTGGTGGTGGCATCGAAAGTAAAGTGGCTTCGGGATGGTACTGGAAACCGGTCCAGCCGGTGGCAATACCTTGCGACAATAAAATAATAAGCCAAAGGGGTAATAAAACAGACGCAGACGCGCTGGACGCCGAATGGGCAGCTGGAAGTGAAGAGAGAGAGAGAGAGTGA 780 0.5179 MPKSIQPFSISFWPRSWGSKMQEQATSSIAASSLPSSSEKSSSSALQHEVKEGIESDEEIRRVPEIGVETVGTSASRPDAGSGAGQDRVQGAGEGQRKRGRNPADKESKRLKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELEERLSTLQNENQMLRHILKNTTASRRGGSGAGANAEGAFRLRRKPGIPDSLADQAGGGIESKVASGWYWKPVQPVAIPCDNKIISQRGNKTDADALDAEWAAGSEERERE 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0574 259 MobiDBLite consensus disorder prediction 235 259 - -
Dere04g0574 259 MobiDBLite consensus disorder prediction 172 202 - -
Dere04g0574 259 MobiDBLite consensus disorder prediction 1 49 - -
Dere04g0574 259 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 112 127 IPR004827 GO:0003700|GO:0006355
Dere04g0574 259 Pfam bZIP transcription factor 106 166 IPR004827 GO:0003700|GO:0006355
Dere04g0574 259 CDD bZIP_HY5-like 110 161 - -
Dere04g0574 259 Coils Coil 104 166 - -
Dere04g0574 259 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 107 170 IPR004827 GO:0003700|GO:0006355
Dere04g0574 259 SUPERFAMILY Leucine zipper domain 109 167 IPR046347 GO:0003700|GO:0006355
Dere04g0574 259 SMART brlzneu 105 169 IPR004827 GO:0003700|GO:0006355
Dere04g0574 259 MobiDBLite consensus disorder prediction 92 114 - -
Dere04g0574 259 FunFam Transcription factor HY5 128 169 - -
Dere04g0574 259 Gene3D Single helix bin 128 169 - -
Dere04g0574 259 MobiDBLite consensus disorder prediction 1 114 - -
Dere04g0574 259 MobiDBLite consensus disorder prediction 50 65 - -
Dere04g0574 259 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 24 187 IPR044280 GO:0000981|GO:0045944
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0574 Dere-ChrDere04 5694209 5698798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0574 21 166 bZIP Transcription Factor Family AT5G11260 78.231 2.21e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere04g0574 bZIP_1 9.9e-14 CL0018