Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0555 ATGGTGCTGTGGTGGCTTCGGCATCACTGCGTGAAAATTCCTGGAGGTTCAACGATAAAAACAAGTCCTTGTTACGGCAATTCAATTTTTCTCGAGATTCAGGTAAAAAATGCCACTTGGATTGCTGTTTTGAGAAGTGATGGCTTTATCACTTTCTCTGGTCTCCAAAGTGCAAGGCCAAGTGTTGTTTCTCCAATTAGAATACCACAAAACTATTGTAGTACACCAGAACCATGTGACCCTTATTACATATGCACTGGTGAGAACAATTGTCGCTGTCCTTCTGTTCTTAGCTCTCGTCCGGATTGCAAACCAGGGATTATTGTCCCTTCTTGTAGGAACTGTTTTTTGTTGGACAGCATAGGAAGCTTCCAGACTTCTGAGACAAATTCTCGGTTCGTTTCTTACATAAAGGTCTCGACTGATGGAGGCGGAGGGGGTGGTGGAAGGAGCAATAAGCACCCCATCGTTGTCTTGGTCATTGTCTTGCCAACATTGCTTGTCGTCTGGGTTCTCGTCTGTATGGGATTTCGATACTACAGTAGGAAGCAAACGTTGCGGGCACCAGAGTGGATCACAAACCATGCTATATCAGAGAAAAGTGATGTTTATAGCTACGGGATGGTGTTGCTGGAGATCATTGGAGGAAGGAAGAATTATGATCCTAATGAAACTTCAGAGAAATCCTACTTCCCATCATTTGCTTTTGAGATGATGGAAGAAGGAAAGCTGAGAGATATTATCGATTCAAAGTTGAATATAGATGAAAACGACGGAAGGTTTCATAATGCAATTACGGTTTCATTGTGGTGCATACAGGAAGACATGTCTCTGAGGCCTTCCATGGTCAAAGTTGTCCAAATGCTTGAGGGTCTCTGTTTTGTTCCTAAGCCTCCAACTTGTTCCCCATTTAGTTTTCGCCTTCACTCAACTGTATTTAGACCCACCAACGAAGGTGGCACTTCTGTAGGCCAATCAGACTCTAGTGATACTCATCTATGTGCAGTTCGGCTTTCAGGACCAAGATAG 1029 0.4354 MVLWWLRHHCVKIPGGSTIKTSPCYGNSIFLEIQVKNATWIAVLRSDGFITFSGLQSARPSVVSPIRIPQNYCSTPEPCDPYYICTGENNCRCPSVLSSRPDCKPGIIVPSCRNCFLLDSIGSFQTSETNSRFVSYIKVSTDGGGGGGGRSNKHPIVVLVIVLPTLLVVWVLVCMGFRYYSRKQTLRAPEWITNHAISEKSDVYSYGMVLLEIIGGRKNYDPNETSEKSYFPSFAFEMMEEGKLRDIIDSKLNIDENDGRFHNAITVSLWCIQEDMSLRPSMVKVVQMLEGLCFVPKPPTCSPFSFRLHSTVFRPTNEGGTSVGQSDSSDTHLCAVRLSGPR 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0555 342 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 113 - -
Dere04g0555 342 Pfam Protein tyrosine and serine/threonine kinase 187 289 IPR001245 GO:0004672|GO:0006468
Dere04g0555 342 Gene3D Transferase(Phosphotransferase) domain 1 175 295 - -
Dere04g0555 342 SUPERFAMILY Protein kinase-like (PK-like) 187 312 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0555 Dere-ChrDere04 5577874 5579649 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0555 188 299 Receptor kinase-like Gene Family AT5G20050 44.538 1.74e-22 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere04g0555 PK_Tyr_Ser-Thr 7.7e-08 CL0016