Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0547 ATGTTTGCCGAAGAGAATGGTCTTAAAGGAGACCCTAGGCTGCAAGCCATCTCCGAAGCCATTAGAGTGGTTCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACGACATTGTTGTTGGATCACAAGGCCTTCAAAGACACGGTCGACATTTTTGTCGATCGTTACAGAGACAAGCACATTTCCGTTGTTGCCGGAGTGGAAGCACGAGGATTCATGTTTGGTCCACCAATTGCTTTGGGCATTGGCGCAAAGTTCGTTCCTTTACGCAAACCTCGAAAATTGCCAGGAGAAGTGATTTCAGAAAAATACGTGCTAGAATATGGAACTGATTGCTTGGAGTTGCATGTTGGGGCTGTTCAGCCCGGTGAACGGGCCTTAGTTATTGATGATATGGTGGCCACAGGTGGAACTCTCTCAGCAGCAATAAGGCTTCTAGAACGTGTTGGTGCTGAAGTGGTTGAGTGTGCTTGTGTCATTGGTGTGCCCGAAGTTAAGGGACAGTGCAAGCTTAGTGGAAAACCATTATATGTGCTTGTGAAGCCACGTCAAATAGATAATTATTTGAGATGTGATTGCAGTTCTGCTTCTGTTGACATACCAAAGGACGAGTCTTTGAGAAAGCAAGCCATCATGTGCTCTTTACAGTTTTCCACTGAATGA 669 0.4514 MFAEENGLKGDPRLQAISEAIRVVPHFPKQGIMFQDITTLLLDHKAFKDTVDIFVDRYRDKHISVVAGVEARGFMFGPPIALGIGAKFVPLRKPRKLPGEVISEKYVLEYGTDCLELHVGAVQPGERALVIDDMVATGGTLSAAIRLLERVGAEVVECACVIGVPEVKGQCKLSGKPLYVLVKPRQIDNYLRCDCSSASVDIPKDESLRKQAIMCSLQFSTE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0547 222 Gene3D - 6 184 IPR029057 -
Dere04g0547 222 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Dere04g0547 222 CDD PRTases_typeI 51 183 IPR000836 -
Dere04g0547 222 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Dere04g0547 222 NCBIfam adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Dere04g0547 222 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 184 - -
Dere04g0547 222 Pfam Phosphoribosyl transferase domain 42 165 IPR000836 -
Dere04g0547 222 SUPERFAMILY PRTase-like 20 180 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0547 Dere-ChrDere04 5497702 5499662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0547 11 183 PRT Gene Family AT1G27450 73.988 1.96e-94 272
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1965 05 29563886 29566409 Dere04g0547 04 5497702 5499662 CCT
Dere04g0547 04 5497702 5499662 Dere04g0547 04 5497702 5499662 ECH
Dere04g0547 04 5497702 5499662 Dere05g1965 05 29563886 29566409 ECH