Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere04g0525 | ATGCAAGATCCTAATTACCCCCGATTTTCTCAGTTAACCAACCATGCATCAGGCCATGGTGATGCTGGAAATTCATTTCTGGCTCTCCTTTCTGGTGCTCCATCATTATTTAAGTGCGAGTTCCAGGAGTTGTCAGATCCAAAGCCTTGTGCCTTCTCTGGTAATTTTCCTGGTGCAGCTGGGAATTTTGTTGTTGATTCCGTAGGAAGTCGGACCTTCCTGACAACCAGTAAGGGGCTAATGACTGAAAATATATGCAATCACGAAATGCAAACCAAGGCGGATATCTTTCCAGTTATAACTTCTAGGGCAATGATTGGTCTGAGTAGTGGCATCAATTATGTATTTCCTGAAATTCAGAGAGTTAATACTCCTGTCCAGCCTTCAGTTCCTGGTAGTGAGAAAGCGAGGGAGCCTCTGTCTTCTACAAGGCAATGCTGTGGTACAAGTACAACCCCTGCATCTAATCTAAATATTTGCAGCTCAGATATTCAAGCTATGCCGAATATGGCATTAGAAGGAAGGTCTTCTAAGATGGCAACTCCTTTCATGAGTGGGTGCCCTCGTGTGTTCTGCATGCGAAAAAGTGGCTATCTTCTTCTCAGCAATACAGGGCTTCTTGGTATTGTTTGCTCATGCCATAGTTGCCACATGTCTGTCCTTAAATTTTGCAAGCATTCAGGGTTACATGATGTCAACCCGGGGGACGCTGTTCGTATGGAAAGTGGAGAGACAATTGCACAATGGCGGAATCTCTACTTCTTGAAGTTTGGGATTAGGTCTCCAGAAAATGAGAGTGAATGGGACTGGCCAGAAGCATTATCAATATCTGCAGCAGCCAACTTGACGAAATCCTATGCAACTAACTCCAATATGTCCAAGAAAGATTTTTCTTATCTTTTGAATTCATCTGCGGTCTCATTAAGCCCTAGGAAGCCTTCTGACACTGTTGTGTTTCCAAAGGACCCTCATACAGTTAATCATCTGTTTATTGGTGCATTTTCCAAAAAACAAGAGACAACTATCCACAATGGTTGTGACAGTCCTATCAAAGATTTTACTGGAATTTCACGAATCAACTTGCATGACTGGGCAAGTTGCCAGTCTACATATACAACTCCCCCAATATTTGTTGGAAATCAACGGGATGATGGTTCTCAGCTTGTTCCTGCATATGTTGATTCTCTAAAAAGGAATGGAAATTTATCTGTTCTCCACTCTCCTTCACATAATCCAATAAGCCTTTTGAAAGACCTTGGCTTCAGTATAAATAAGAATGGAAATGAGGGTATTGTTGGCAGAGAAGCAACTTCCTCAAATATTGAGTTGAGGCTTGGTCAACAACCTCAGACAGGAAATTCAATTCTATCCATTCTTGAACCACAGCAGTTTGATGCCCATGTCAGTCCACCAAAATTGCAGTATTTGAAGCGGATGGCTCAAAATAGTGCAACTTCCCTCAGCATAGAGGAGGAATTGCAAAATAACTTTTGCTATGCTGCTGGTGCATCTAATTCCAAAATGGCTGAAGAACAATCTCAGCAGAAACTCAGGAACTACATTTCAGGTGTTAATAATGGTTTAGGTACTGTTAGAGCCAGATCAGAAACTGATGATGTGGCCAAGGGCTTTGTGTTTTCACCTTATTCGCAATTTAATTGTCAGTCTCAGGGGAACACAAAGGCTAATGAACTTTTGGTAGATGGTGGGCTTATCAGGTCCAAGTTACTTCATTCTGGATCTGATACCTTACTGTCTGATTTCAGTGATGATCACATAGAAAGGCAGTTAAACACTTCTTCACTTGGTTCCAACAAATTTTTGAACAATGATAAAGGTGTGGTCTGTGCTAAAGAATCTTATGCCAAATTTGATTCAGGATCTCGAACTACTACATTAATGGAACATCATGGCTTCATGAGAGCTGTTGGTGGAAGCAGTGATTGCTGTATCGTAGCACCAAATGGAAAGATCTCACGTTGTGAACCAAGCATGCCAGTGGATGCATCTGCTGGTATGAACTTTTCTTGTGGTTCTAACACGGTTGCTTCTGTTGGACAAGACAGTAATGTGACTTTAAGATCCTTAGGTAGTCAGTTGGCTTCTCGGATGCCATCTGAAGGATTCTTGATGGGCTGCCCCTTGCATGTTTCTAGCTCTACATCAAATCAGGCTCCTACTTTGCTGGAACAACAGGGCATTAATATGGAGACATGTTTGCTTGATGAAAATATGAGATTGCTTGCATTGACAGAGATACTGGAGTTATCTAAGCAGCAATATGCATTGTATTTGCATGAAATGAATCAAACACAAGGGAGATCCTGCAGTTTTTCAAATGTTCAGCACTCTATATATGAGGCTGCAACATCTGAACAGTGTACTTCTGAAGTTTTGTTGAAATCACAGCTAAAGAAAGGGGCTTGTGGGAATCATGGGATTACTGATGATTTAGAGAAAGTGGCTTCTCTTACAGGCAAGCATACTCCATTTTCCTTTTTCCCCCATTCTCAATGCTTTGGAAGAAGTAAACGCAATAATAGATCCTGTGAATGTGAAACATGCTCCAAGCAACCACCAGATACACATTTAGTCGGCAAATATACTTGTGCTGCTCAAGTGAGTTGTGCTGGAAATAATTTTGTCTTGGGAGTTGGATCTTCTCCTTTTACCTGTAGACAACAACTAGATAACACTAGTGGTGGAATGTCTTTGATGATTTCTTCAAATTTTACCAAAGATTGGAATGCTTCTAAAGATAAATATATCCAATTTGAGAAAGGTTCAAAGTTTGATGGCCATGATCTTAACAAAATTGGCTCGCACACTCCTCAATGGAGAGATGTACCAAGAAAGGTCGGGAAAGGAGTTTGTGATGTGGGATCCTTGGATCAGCCAGCTACCGTTTTAGATTGTGAAGAGCAAGTTGGGGATCAACTTGGAAATGTTCCTGCTAAGCGCCTGAAAAGAACTACCTATATGGATGACTCTTTCAAAGAGCAAGAGAGTTCTAACGTTTCTGCCCCTGTGGTTACTCAGTTGTCTGTTGAGGTTAACAATGTTGATTCTTCCACTGTTGAGGCTGCAGACAATCAATATTTTGATAATGTTGTAGTTGATGAGGGGTCGGGCATTGAGAAAGGCTGGTCATCTGATGCATTTGAAAGTGATAGGAGTTCTGAGTTCCTTGGGTCAACTTGTGAGACTCACGTGAAGAAGGCTTATCTAGGAGTCTTGAATGATCAACCACGTCGCAGTCTCCTTCAGGAGCTTAAACTGTTAAATTCCTTGACATGGAAGAAAGGAAGGGATCAAAACTTTCCTGTGCTTTCTGTTAAATGCAGAACCAATCAATCTCTAAAAGTCAAGAGGAGTTTTAAAGGTAAAAAGCAAAAAAGAGCAGACGTAAAGATGCTAGATGCTATACTCACTTCTGGAATTCCTTCTTCATTGCATAATGAGAATGATGAAAGTACTGGGCTTGTTGATTTCCCTTCCGATTTGTCCAAAAAGATGCAAATGTATTTTGCATCTGGCCAGCAAAGATCTACAACCTGGGCTTCTTTTCTTGAGCCTAGCACCACAAGCAGAGCTACTCTTTCATCCAAATTTCTCTCTTGTAACAGTCATTTAAGAGGGCATGACAGTGACAGAGAGGGACAAAATACTTATGAGTCAGAATCAGATAGTGATGCTGAGTTTCACAAACTTGCTGAAGTTTCTGGAAGAAAGAAACTAAGAAAGGATTTTGCTTCTGAATCATTTAGACAGTTTCAAAACCAAGAGCCAGCTTGTGAGGAACCAGAAAATGTTACGATGAAGTCCTTTTATAGCAGGCAGGTAAATGCTTTTAGAGAAAAAAGACCGGTAGTATGTGGAGAATATGGTGAAATTTCTAGTGGAGTTTTTGATGGAAAGATGCCAAAGCCAGCAAAAATTGTTTCTCTCAGTAAGGTTCTCAAAACTTCCAAAAAAAGTAGAGTCCCTACAAATGAAAAATTCAGATTCACTTCAAAAAAGAAATGGAAGAAGTTGAGATCCAGAACAAGTAATGGACAATCTGGTTTGAATTCTAAAGATAATAATGGAACCACGAATGCTATAGTTTGTGATGAAACAAATGTTGACATATCCAAGGAAGATATGAAGACAAGCAACAAGCCACTTGTTATTTGCAAAGTGAAGAGAGATGTCAAAGCTAAGCAGGGTGGTAGTATTGTTGACAAGATTCATGCTCCATTGAAGCTGAAGGGCAAGGAAACTCGGAAGCGCAGCATTTATGAACTCACAGAAACTAGAGTGAAGAAGATTTGGGAGTTTGCTGAAGATAGGGAGCATGATTTGTGTAACACAAATAGAAAAAAATATGTTCAAGAACACAGGGGTGCCTCCAATGTGGAATCAGATGCTTTCTGCTCTGTATGTCGAAGCTCAAGCAATGATGAAATTAATTGTCTGTTGGAGTGTAATCAATGTCTAATCAGAGTGCATCAAGCTTGCTATGGCATTTGCACATTACCTAAAGGCCGATGGTGTTGCAGACCATGCCGAACAAATTCAAAAGATACTGCTTGTGTCCTATGTGGTTATGGAGGCGGAGCTATGACTCGAGCACTGCAGACTCACACAATTGTCAAAAGCCTGTTGAAAGTTTGGAATATTGAAAAAGTGGGCAAGCTTAAGCATACAACTCCACATGAAAGTTATGGAAAGAAAATGAGTTCCTTTCGTTTTGCAAAGTCTGCATCTGAAGGTGACCAAAAATGTGTATCAAGGCCTGAAAATATTGGGACATCGACTGCAGATATGTGGAAAGTTGAGAGGTCTACCATGCATGTGCAACATGCCCGATACCCTAGTGGTAATTTTAATGTACATAACAGTATTACAGCAGGAGTATCTGATACAACTGTTAAGCAGTGGGTTCACATGGTTTGTGGGCTTTGGACTCCTGGAACACGATGCCCCAATGTTGACACCATGAGTGCTTTTGATGTAACTGGTGTTTCACGTCCAAAAGCAGATACCGTTTGTTCCATTTGTAATCGAAGGGGTGGTTCTTGTATAGAATGCAGGGTTGTTGGTTGCTCTGTACAGTTTCATCCTTGGTGTGCTCATCAAAAGAACCTGTTGCAAAGTGAGACTGAAGGTGTTGACGATGAAAAGGTGGGATTTTATGGAAGATGTGTGCTTCATGCTAATGACCTCATTTGCCAGACCAAACCTGATCGTATTGGCACTGAGATGGGCTGTCTGGAGAAAATGGAATCAACCTGTGCTAGGACAGAGGGTTACAAGGGGCGCAGGAGTGATGGTTTTCACCATAATTATTACGGCAATAGAGGCAAGGGTGGATGCCTTGTTCCTCAGGAGCAGTTAAATGCTTGGATTCACATTAATGGGCAGAAGTTGTGTTCACAGGGACTCTCAAAATTTTCTGCATCAGATATTGAATATGATTGCCGGAAGGAATATGCTCGGTACAAACAAGCAAAGGGTTGGAAACACCTTGTTGTTTACAAATCTGGCATACATGCCCTTGGGCTTTACACTTCTCGGTTCATTTCCCGGGGTGAAATGGTTGTTGAGTATGTTGGTGAGATTGTTGGGTTACGTGTGGCTGATAAAAGAGAAATTGAGTATCAGTCTGGGAGAAAAGTACAGTATAAGAGTGCCTGCTACTTCTTCAGGATAGACAAAGAGCATATTATTGATGCCACAAGGAAAGGAGGGATTGCTCGTTTTGTTAATCACTCCTGCCTGCCAAATTGCGTGGCTAAAGTGATGACTGTAAGACATGAAAAGAAGGTTGTCTTTTTTGCGGAGAGGGACATATTTCCTGGTGAAGAGATAACGTATGATTACCACTTTAACCACGAAGATGGACAGAAGATTCCTTGTTACTGCAATTCAAAAAATTGCAGGCGGTACCTGAACTGA | 5940 | 0.4113 | MQDPNYPRFSQLTNHASGHGDAGNSFLALLSGAPSLFKCEFQELSDPKPCAFSGNFPGAAGNFVVDSVGSRTFLTTSKGLMTENICNHEMQTKADIFPVITSRAMIGLSSGINYVFPEIQRVNTPVQPSVPGSEKAREPLSSTRQCCGTSTTPASNLNICSSDIQAMPNMALEGRSSKMATPFMSGCPRVFCMRKSGYLLLSNTGLLGIVCSCHSCHMSVLKFCKHSGLHDVNPGDAVRMESGETIAQWRNLYFLKFGIRSPENESEWDWPEALSISAAANLTKSYATNSNMSKKDFSYLLNSSAVSLSPRKPSDTVVFPKDPHTVNHLFIGAFSKKQETTIHNGCDSPIKDFTGISRINLHDWASCQSTYTTPPIFVGNQRDDGSQLVPAYVDSLKRNGNLSVLHSPSHNPISLLKDLGFSINKNGNEGIVGREATSSNIELRLGQQPQTGNSILSILEPQQFDAHVSPPKLQYLKRMAQNSATSLSIEEELQNNFCYAAGASNSKMAEEQSQQKLRNYISGVNNGLGTVRARSETDDVAKGFVFSPYSQFNCQSQGNTKANELLVDGGLIRSKLLHSGSDTLLSDFSDDHIERQLNTSSLGSNKFLNNDKGVVCAKESYAKFDSGSRTTTLMEHHGFMRAVGGSSDCCIVAPNGKISRCEPSMPVDASAGMNFSCGSNTVASVGQDSNVTLRSLGSQLASRMPSEGFLMGCPLHVSSSTSNQAPTLLEQQGINMETCLLDENMRLLALTEILELSKQQYALYLHEMNQTQGRSCSFSNVQHSIYEAATSEQCTSEVLLKSQLKKGACGNHGITDDLEKVASLTGKHTPFSFFPHSQCFGRSKRNNRSCECETCSKQPPDTHLVGKYTCAAQVSCAGNNFVLGVGSSPFTCRQQLDNTSGGMSLMISSNFTKDWNASKDKYIQFEKGSKFDGHDLNKIGSHTPQWRDVPRKVGKGVCDVGSLDQPATVLDCEEQVGDQLGNVPAKRLKRTTYMDDSFKEQESSNVSAPVVTQLSVEVNNVDSSTVEAADNQYFDNVVVDEGSGIEKGWSSDAFESDRSSEFLGSTCETHVKKAYLGVLNDQPRRSLLQELKLLNSLTWKKGRDQNFPVLSVKCRTNQSLKVKRSFKGKKQKRADVKMLDAILTSGIPSSLHNENDESTGLVDFPSDLSKKMQMYFASGQQRSTTWASFLEPSTTSRATLSSKFLSCNSHLRGHDSDREGQNTYESESDSDAEFHKLAEVSGRKKLRKDFASESFRQFQNQEPACEEPENVTMKSFYSRQVNAFREKRPVVCGEYGEISSGVFDGKMPKPAKIVSLSKVLKTSKKSRVPTNEKFRFTSKKKWKKLRSRTSNGQSGLNSKDNNGTTNAIVCDETNVDISKEDMKTSNKPLVICKVKRDVKAKQGGSIVDKIHAPLKLKGKETRKRSIYELTETRVKKIWEFAEDREHDLCNTNRKKYVQEHRGASNVESDAFCSVCRSSSNDEINCLLECNQCLIRVHQACYGICTLPKGRWCCRPCRTNSKDTACVLCGYGGGAMTRALQTHTIVKSLLKVWNIEKVGKLKHTTPHESYGKKMSSFRFAKSASEGDQKCVSRPENIGTSTADMWKVERSTMHVQHARYPSGNFNVHNSITAGVSDTTVKQWVHMVCGLWTPGTRCPNVDTMSAFDVTGVSRPKADTVCSICNRRGGSCIECRVVGCSVQFHPWCAHQKNLLQSETEGVDDEKVGFYGRCVLHANDLICQTKPDRIGTEMGCLEKMESTCARTEGYKGRRSDGFHHNYYGNRGKGGCLVPQEQLNAWIHINGQKLCSQGLSKFSASDIEYDCRKEYARYKQAKGWKHLVVYKSGIHALGLYTSRFISRGEMVVEYVGEIVGLRVADKREIEYQSGRKVQYKSACYFFRIDKEHIIDATRKGGIARFVNHSCLPNCVAKVMTVRHEKKVVFFAERDIFPGEEITYDYHFNHEDGQKIPCYCNSKNCRRYLN | 1979 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere04g0525 | 1979 | MobiDBLite | consensus disorder prediction | 126 | 145 | - | - | |
Dere04g0525 | 1979 | MobiDBLite | consensus disorder prediction | 1344 | 1365 | - | - | |
Dere04g0525 | 1979 | Pfam | PHD-finger | 1484 | 1517 | - | - | |
Dere04g0525 | 1979 | SMART | set_7 | 1835 | 1962 | IPR001214 | GO:0005515 | |
Dere04g0525 | 1979 | PANTHER | HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER | 776 | 1979 | - | - | |
Dere04g0525 | 1979 | Gene3D | SET domain | 1737 | 1979 | IPR046341 | - | |
Dere04g0525 | 1979 | MobiDBLite | consensus disorder prediction | 1212 | 1231 | - | - | |
Dere04g0525 | 1979 | CDD | SET_SETD1-like | 1837 | 1975 | - | - | |
Dere04g0525 | 1979 | ProSiteProfiles | Zinc finger PHD-type profile. | 1469 | 1519 | IPR019787 | - | |
Dere04g0525 | 1979 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1623 | 1736 | IPR013083 | - | |
Dere04g0525 | 1979 | SUPERFAMILY | FYVE/PHD zinc finger | 1466 | 1521 | IPR011011 | - | |
Dere04g0525 | 1979 | ProSiteProfiles | Post-SET domain profile. | 1963 | 1979 | IPR003616 | - | |
Dere04g0525 | 1979 | Pfam | PHD-zinc-finger like domain | 1635 | 1716 | - | - | |
Dere04g0525 | 1979 | SMART | PHD_3 | 1471 | 1517 | IPR001965 | - | |
Dere04g0525 | 1979 | SMART | PHD_3 | 1677 | 1733 | IPR001965 | - | |
Dere04g0525 | 1979 | SUPERFAMILY | SET domain | 1825 | 1975 | IPR046341 | - | |
Dere04g0525 | 1979 | SMART | PostSET_3 | 1963 | 1979 | IPR003616 | - | |
Dere04g0525 | 1979 | ProSiteProfiles | SET domain profile. | 1835 | 1956 | IPR001214 | GO:0005515 | |
Dere04g0525 | 1979 | Pfam | SET domain | 1848 | 1955 | IPR001214 | GO:0005515 | |
Dere04g0525 | 1979 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1455 | 1532 | IPR013083 | - | |
Dere04g0525 | 1979 | MobiDBLite | consensus disorder prediction | 1348 | 1365 | - | - | |
Dere04g0525 | 1979 | CDD | ePHD | 1635 | 1723 | - | - | |
Dere04g0525 | 1979 | ProSitePatterns | Zinc finger PHD-type signature. | 1472 | 1516 | IPR019786 | - | |
Dere04g0525 | 1979 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 1586 | 1733 | IPR034732 | - | |
Dere04g0525 | 1979 | Pfam | Tify domain binding domain | 206 | 251 | IPR032308 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere04g0525 | Dere-ChrDere04 | 5299589 | 5311365 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere04g0525 | 1837 | 1979 | C2H2 Transcription Factor Family | AT2G23740 | 33.129 | 1.38e-15 | 81.3 |