Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0525 ATGCAAGATCCTAATTACCCCCGATTTTCTCAGTTAACCAACCATGCATCAGGCCATGGTGATGCTGGAAATTCATTTCTGGCTCTCCTTTCTGGTGCTCCATCATTATTTAAGTGCGAGTTCCAGGAGTTGTCAGATCCAAAGCCTTGTGCCTTCTCTGGTAATTTTCCTGGTGCAGCTGGGAATTTTGTTGTTGATTCCGTAGGAAGTCGGACCTTCCTGACAACCAGTAAGGGGCTAATGACTGAAAATATATGCAATCACGAAATGCAAACCAAGGCGGATATCTTTCCAGTTATAACTTCTAGGGCAATGATTGGTCTGAGTAGTGGCATCAATTATGTATTTCCTGAAATTCAGAGAGTTAATACTCCTGTCCAGCCTTCAGTTCCTGGTAGTGAGAAAGCGAGGGAGCCTCTGTCTTCTACAAGGCAATGCTGTGGTACAAGTACAACCCCTGCATCTAATCTAAATATTTGCAGCTCAGATATTCAAGCTATGCCGAATATGGCATTAGAAGGAAGGTCTTCTAAGATGGCAACTCCTTTCATGAGTGGGTGCCCTCGTGTGTTCTGCATGCGAAAAAGTGGCTATCTTCTTCTCAGCAATACAGGGCTTCTTGGTATTGTTTGCTCATGCCATAGTTGCCACATGTCTGTCCTTAAATTTTGCAAGCATTCAGGGTTACATGATGTCAACCCGGGGGACGCTGTTCGTATGGAAAGTGGAGAGACAATTGCACAATGGCGGAATCTCTACTTCTTGAAGTTTGGGATTAGGTCTCCAGAAAATGAGAGTGAATGGGACTGGCCAGAAGCATTATCAATATCTGCAGCAGCCAACTTGACGAAATCCTATGCAACTAACTCCAATATGTCCAAGAAAGATTTTTCTTATCTTTTGAATTCATCTGCGGTCTCATTAAGCCCTAGGAAGCCTTCTGACACTGTTGTGTTTCCAAAGGACCCTCATACAGTTAATCATCTGTTTATTGGTGCATTTTCCAAAAAACAAGAGACAACTATCCACAATGGTTGTGACAGTCCTATCAAAGATTTTACTGGAATTTCACGAATCAACTTGCATGACTGGGCAAGTTGCCAGTCTACATATACAACTCCCCCAATATTTGTTGGAAATCAACGGGATGATGGTTCTCAGCTTGTTCCTGCATATGTTGATTCTCTAAAAAGGAATGGAAATTTATCTGTTCTCCACTCTCCTTCACATAATCCAATAAGCCTTTTGAAAGACCTTGGCTTCAGTATAAATAAGAATGGAAATGAGGGTATTGTTGGCAGAGAAGCAACTTCCTCAAATATTGAGTTGAGGCTTGGTCAACAACCTCAGACAGGAAATTCAATTCTATCCATTCTTGAACCACAGCAGTTTGATGCCCATGTCAGTCCACCAAAATTGCAGTATTTGAAGCGGATGGCTCAAAATAGTGCAACTTCCCTCAGCATAGAGGAGGAATTGCAAAATAACTTTTGCTATGCTGCTGGTGCATCTAATTCCAAAATGGCTGAAGAACAATCTCAGCAGAAACTCAGGAACTACATTTCAGGTGTTAATAATGGTTTAGGTACTGTTAGAGCCAGATCAGAAACTGATGATGTGGCCAAGGGCTTTGTGTTTTCACCTTATTCGCAATTTAATTGTCAGTCTCAGGGGAACACAAAGGCTAATGAACTTTTGGTAGATGGTGGGCTTATCAGGTCCAAGTTACTTCATTCTGGATCTGATACCTTACTGTCTGATTTCAGTGATGATCACATAGAAAGGCAGTTAAACACTTCTTCACTTGGTTCCAACAAATTTTTGAACAATGATAAAGGTGTGGTCTGTGCTAAAGAATCTTATGCCAAATTTGATTCAGGATCTCGAACTACTACATTAATGGAACATCATGGCTTCATGAGAGCTGTTGGTGGAAGCAGTGATTGCTGTATCGTAGCACCAAATGGAAAGATCTCACGTTGTGAACCAAGCATGCCAGTGGATGCATCTGCTGGTATGAACTTTTCTTGTGGTTCTAACACGGTTGCTTCTGTTGGACAAGACAGTAATGTGACTTTAAGATCCTTAGGTAGTCAGTTGGCTTCTCGGATGCCATCTGAAGGATTCTTGATGGGCTGCCCCTTGCATGTTTCTAGCTCTACATCAAATCAGGCTCCTACTTTGCTGGAACAACAGGGCATTAATATGGAGACATGTTTGCTTGATGAAAATATGAGATTGCTTGCATTGACAGAGATACTGGAGTTATCTAAGCAGCAATATGCATTGTATTTGCATGAAATGAATCAAACACAAGGGAGATCCTGCAGTTTTTCAAATGTTCAGCACTCTATATATGAGGCTGCAACATCTGAACAGTGTACTTCTGAAGTTTTGTTGAAATCACAGCTAAAGAAAGGGGCTTGTGGGAATCATGGGATTACTGATGATTTAGAGAAAGTGGCTTCTCTTACAGGCAAGCATACTCCATTTTCCTTTTTCCCCCATTCTCAATGCTTTGGAAGAAGTAAACGCAATAATAGATCCTGTGAATGTGAAACATGCTCCAAGCAACCACCAGATACACATTTAGTCGGCAAATATACTTGTGCTGCTCAAGTGAGTTGTGCTGGAAATAATTTTGTCTTGGGAGTTGGATCTTCTCCTTTTACCTGTAGACAACAACTAGATAACACTAGTGGTGGAATGTCTTTGATGATTTCTTCAAATTTTACCAAAGATTGGAATGCTTCTAAAGATAAATATATCCAATTTGAGAAAGGTTCAAAGTTTGATGGCCATGATCTTAACAAAATTGGCTCGCACACTCCTCAATGGAGAGATGTACCAAGAAAGGTCGGGAAAGGAGTTTGTGATGTGGGATCCTTGGATCAGCCAGCTACCGTTTTAGATTGTGAAGAGCAAGTTGGGGATCAACTTGGAAATGTTCCTGCTAAGCGCCTGAAAAGAACTACCTATATGGATGACTCTTTCAAAGAGCAAGAGAGTTCTAACGTTTCTGCCCCTGTGGTTACTCAGTTGTCTGTTGAGGTTAACAATGTTGATTCTTCCACTGTTGAGGCTGCAGACAATCAATATTTTGATAATGTTGTAGTTGATGAGGGGTCGGGCATTGAGAAAGGCTGGTCATCTGATGCATTTGAAAGTGATAGGAGTTCTGAGTTCCTTGGGTCAACTTGTGAGACTCACGTGAAGAAGGCTTATCTAGGAGTCTTGAATGATCAACCACGTCGCAGTCTCCTTCAGGAGCTTAAACTGTTAAATTCCTTGACATGGAAGAAAGGAAGGGATCAAAACTTTCCTGTGCTTTCTGTTAAATGCAGAACCAATCAATCTCTAAAAGTCAAGAGGAGTTTTAAAGGTAAAAAGCAAAAAAGAGCAGACGTAAAGATGCTAGATGCTATACTCACTTCTGGAATTCCTTCTTCATTGCATAATGAGAATGATGAAAGTACTGGGCTTGTTGATTTCCCTTCCGATTTGTCCAAAAAGATGCAAATGTATTTTGCATCTGGCCAGCAAAGATCTACAACCTGGGCTTCTTTTCTTGAGCCTAGCACCACAAGCAGAGCTACTCTTTCATCCAAATTTCTCTCTTGTAACAGTCATTTAAGAGGGCATGACAGTGACAGAGAGGGACAAAATACTTATGAGTCAGAATCAGATAGTGATGCTGAGTTTCACAAACTTGCTGAAGTTTCTGGAAGAAAGAAACTAAGAAAGGATTTTGCTTCTGAATCATTTAGACAGTTTCAAAACCAAGAGCCAGCTTGTGAGGAACCAGAAAATGTTACGATGAAGTCCTTTTATAGCAGGCAGGTAAATGCTTTTAGAGAAAAAAGACCGGTAGTATGTGGAGAATATGGTGAAATTTCTAGTGGAGTTTTTGATGGAAAGATGCCAAAGCCAGCAAAAATTGTTTCTCTCAGTAAGGTTCTCAAAACTTCCAAAAAAAGTAGAGTCCCTACAAATGAAAAATTCAGATTCACTTCAAAAAAGAAATGGAAGAAGTTGAGATCCAGAACAAGTAATGGACAATCTGGTTTGAATTCTAAAGATAATAATGGAACCACGAATGCTATAGTTTGTGATGAAACAAATGTTGACATATCCAAGGAAGATATGAAGACAAGCAACAAGCCACTTGTTATTTGCAAAGTGAAGAGAGATGTCAAAGCTAAGCAGGGTGGTAGTATTGTTGACAAGATTCATGCTCCATTGAAGCTGAAGGGCAAGGAAACTCGGAAGCGCAGCATTTATGAACTCACAGAAACTAGAGTGAAGAAGATTTGGGAGTTTGCTGAAGATAGGGAGCATGATTTGTGTAACACAAATAGAAAAAAATATGTTCAAGAACACAGGGGTGCCTCCAATGTGGAATCAGATGCTTTCTGCTCTGTATGTCGAAGCTCAAGCAATGATGAAATTAATTGTCTGTTGGAGTGTAATCAATGTCTAATCAGAGTGCATCAAGCTTGCTATGGCATTTGCACATTACCTAAAGGCCGATGGTGTTGCAGACCATGCCGAACAAATTCAAAAGATACTGCTTGTGTCCTATGTGGTTATGGAGGCGGAGCTATGACTCGAGCACTGCAGACTCACACAATTGTCAAAAGCCTGTTGAAAGTTTGGAATATTGAAAAAGTGGGCAAGCTTAAGCATACAACTCCACATGAAAGTTATGGAAAGAAAATGAGTTCCTTTCGTTTTGCAAAGTCTGCATCTGAAGGTGACCAAAAATGTGTATCAAGGCCTGAAAATATTGGGACATCGACTGCAGATATGTGGAAAGTTGAGAGGTCTACCATGCATGTGCAACATGCCCGATACCCTAGTGGTAATTTTAATGTACATAACAGTATTACAGCAGGAGTATCTGATACAACTGTTAAGCAGTGGGTTCACATGGTTTGTGGGCTTTGGACTCCTGGAACACGATGCCCCAATGTTGACACCATGAGTGCTTTTGATGTAACTGGTGTTTCACGTCCAAAAGCAGATACCGTTTGTTCCATTTGTAATCGAAGGGGTGGTTCTTGTATAGAATGCAGGGTTGTTGGTTGCTCTGTACAGTTTCATCCTTGGTGTGCTCATCAAAAGAACCTGTTGCAAAGTGAGACTGAAGGTGTTGACGATGAAAAGGTGGGATTTTATGGAAGATGTGTGCTTCATGCTAATGACCTCATTTGCCAGACCAAACCTGATCGTATTGGCACTGAGATGGGCTGTCTGGAGAAAATGGAATCAACCTGTGCTAGGACAGAGGGTTACAAGGGGCGCAGGAGTGATGGTTTTCACCATAATTATTACGGCAATAGAGGCAAGGGTGGATGCCTTGTTCCTCAGGAGCAGTTAAATGCTTGGATTCACATTAATGGGCAGAAGTTGTGTTCACAGGGACTCTCAAAATTTTCTGCATCAGATATTGAATATGATTGCCGGAAGGAATATGCTCGGTACAAACAAGCAAAGGGTTGGAAACACCTTGTTGTTTACAAATCTGGCATACATGCCCTTGGGCTTTACACTTCTCGGTTCATTTCCCGGGGTGAAATGGTTGTTGAGTATGTTGGTGAGATTGTTGGGTTACGTGTGGCTGATAAAAGAGAAATTGAGTATCAGTCTGGGAGAAAAGTACAGTATAAGAGTGCCTGCTACTTCTTCAGGATAGACAAAGAGCATATTATTGATGCCACAAGGAAAGGAGGGATTGCTCGTTTTGTTAATCACTCCTGCCTGCCAAATTGCGTGGCTAAAGTGATGACTGTAAGACATGAAAAGAAGGTTGTCTTTTTTGCGGAGAGGGACATATTTCCTGGTGAAGAGATAACGTATGATTACCACTTTAACCACGAAGATGGACAGAAGATTCCTTGTTACTGCAATTCAAAAAATTGCAGGCGGTACCTGAACTGA 5940 0.4113 MQDPNYPRFSQLTNHASGHGDAGNSFLALLSGAPSLFKCEFQELSDPKPCAFSGNFPGAAGNFVVDSVGSRTFLTTSKGLMTENICNHEMQTKADIFPVITSRAMIGLSSGINYVFPEIQRVNTPVQPSVPGSEKAREPLSSTRQCCGTSTTPASNLNICSSDIQAMPNMALEGRSSKMATPFMSGCPRVFCMRKSGYLLLSNTGLLGIVCSCHSCHMSVLKFCKHSGLHDVNPGDAVRMESGETIAQWRNLYFLKFGIRSPENESEWDWPEALSISAAANLTKSYATNSNMSKKDFSYLLNSSAVSLSPRKPSDTVVFPKDPHTVNHLFIGAFSKKQETTIHNGCDSPIKDFTGISRINLHDWASCQSTYTTPPIFVGNQRDDGSQLVPAYVDSLKRNGNLSVLHSPSHNPISLLKDLGFSINKNGNEGIVGREATSSNIELRLGQQPQTGNSILSILEPQQFDAHVSPPKLQYLKRMAQNSATSLSIEEELQNNFCYAAGASNSKMAEEQSQQKLRNYISGVNNGLGTVRARSETDDVAKGFVFSPYSQFNCQSQGNTKANELLVDGGLIRSKLLHSGSDTLLSDFSDDHIERQLNTSSLGSNKFLNNDKGVVCAKESYAKFDSGSRTTTLMEHHGFMRAVGGSSDCCIVAPNGKISRCEPSMPVDASAGMNFSCGSNTVASVGQDSNVTLRSLGSQLASRMPSEGFLMGCPLHVSSSTSNQAPTLLEQQGINMETCLLDENMRLLALTEILELSKQQYALYLHEMNQTQGRSCSFSNVQHSIYEAATSEQCTSEVLLKSQLKKGACGNHGITDDLEKVASLTGKHTPFSFFPHSQCFGRSKRNNRSCECETCSKQPPDTHLVGKYTCAAQVSCAGNNFVLGVGSSPFTCRQQLDNTSGGMSLMISSNFTKDWNASKDKYIQFEKGSKFDGHDLNKIGSHTPQWRDVPRKVGKGVCDVGSLDQPATVLDCEEQVGDQLGNVPAKRLKRTTYMDDSFKEQESSNVSAPVVTQLSVEVNNVDSSTVEAADNQYFDNVVVDEGSGIEKGWSSDAFESDRSSEFLGSTCETHVKKAYLGVLNDQPRRSLLQELKLLNSLTWKKGRDQNFPVLSVKCRTNQSLKVKRSFKGKKQKRADVKMLDAILTSGIPSSLHNENDESTGLVDFPSDLSKKMQMYFASGQQRSTTWASFLEPSTTSRATLSSKFLSCNSHLRGHDSDREGQNTYESESDSDAEFHKLAEVSGRKKLRKDFASESFRQFQNQEPACEEPENVTMKSFYSRQVNAFREKRPVVCGEYGEISSGVFDGKMPKPAKIVSLSKVLKTSKKSRVPTNEKFRFTSKKKWKKLRSRTSNGQSGLNSKDNNGTTNAIVCDETNVDISKEDMKTSNKPLVICKVKRDVKAKQGGSIVDKIHAPLKLKGKETRKRSIYELTETRVKKIWEFAEDREHDLCNTNRKKYVQEHRGASNVESDAFCSVCRSSSNDEINCLLECNQCLIRVHQACYGICTLPKGRWCCRPCRTNSKDTACVLCGYGGGAMTRALQTHTIVKSLLKVWNIEKVGKLKHTTPHESYGKKMSSFRFAKSASEGDQKCVSRPENIGTSTADMWKVERSTMHVQHARYPSGNFNVHNSITAGVSDTTVKQWVHMVCGLWTPGTRCPNVDTMSAFDVTGVSRPKADTVCSICNRRGGSCIECRVVGCSVQFHPWCAHQKNLLQSETEGVDDEKVGFYGRCVLHANDLICQTKPDRIGTEMGCLEKMESTCARTEGYKGRRSDGFHHNYYGNRGKGGCLVPQEQLNAWIHINGQKLCSQGLSKFSASDIEYDCRKEYARYKQAKGWKHLVVYKSGIHALGLYTSRFISRGEMVVEYVGEIVGLRVADKREIEYQSGRKVQYKSACYFFRIDKEHIIDATRKGGIARFVNHSCLPNCVAKVMTVRHEKKVVFFAERDIFPGEEITYDYHFNHEDGQKIPCYCNSKNCRRYLN 1979
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0525 1979 MobiDBLite consensus disorder prediction 126 145 - -
Dere04g0525 1979 MobiDBLite consensus disorder prediction 1344 1365 - -
Dere04g0525 1979 Pfam PHD-finger 1484 1517 - -
Dere04g0525 1979 SMART set_7 1835 1962 IPR001214 GO:0005515
Dere04g0525 1979 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 776 1979 - -
Dere04g0525 1979 Gene3D SET domain 1737 1979 IPR046341 -
Dere04g0525 1979 MobiDBLite consensus disorder prediction 1212 1231 - -
Dere04g0525 1979 CDD SET_SETD1-like 1837 1975 - -
Dere04g0525 1979 ProSiteProfiles Zinc finger PHD-type profile. 1469 1519 IPR019787 -
Dere04g0525 1979 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1623 1736 IPR013083 -
Dere04g0525 1979 SUPERFAMILY FYVE/PHD zinc finger 1466 1521 IPR011011 -
Dere04g0525 1979 ProSiteProfiles Post-SET domain profile. 1963 1979 IPR003616 -
Dere04g0525 1979 Pfam PHD-zinc-finger like domain 1635 1716 - -
Dere04g0525 1979 SMART PHD_3 1471 1517 IPR001965 -
Dere04g0525 1979 SMART PHD_3 1677 1733 IPR001965 -
Dere04g0525 1979 SUPERFAMILY SET domain 1825 1975 IPR046341 -
Dere04g0525 1979 SMART PostSET_3 1963 1979 IPR003616 -
Dere04g0525 1979 ProSiteProfiles SET domain profile. 1835 1956 IPR001214 GO:0005515
Dere04g0525 1979 Pfam SET domain 1848 1955 IPR001214 GO:0005515
Dere04g0525 1979 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1455 1532 IPR013083 -
Dere04g0525 1979 MobiDBLite consensus disorder prediction 1348 1365 - -
Dere04g0525 1979 CDD ePHD 1635 1723 - -
Dere04g0525 1979 ProSitePatterns Zinc finger PHD-type signature. 1472 1516 IPR019786 -
Dere04g0525 1979 ProSiteProfiles Extended PHD (ePHD) domain profile. 1586 1733 IPR034732 -
Dere04g0525 1979 Pfam Tify domain binding domain 206 251 IPR032308 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere04g0525 Dere-ChrDere04 5299589 5311365 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0525 1837 1979 C2H2 Transcription Factor Family AT2G23740 33.129 1.38e-15 81.3
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere04g0525 SET 3.4e-17 No_clan