Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0509 ATGAGCACTGCAAAACATGAAAACTATGTTAGCCCTAGCAGTAGTGCTACAGTTTCAATTTCAAGGGTTGTGCCTGTGTATCCCAAGCATGTGCAGGCTCTGAAAGTTTTGAACCTCTCCAATTTAGATAGGCAGTGCCCTACTCTTATGTACTTGGTGTTCTTTTATAATCCACCTCAGGCTTTCAAAGATTTAACCCTCAGTTCAGTTTTCAGCAGCTTGAAATCAGGGTTGGAAGAGACCCTAAGCGTGTGGTACCCAGCTGCAGGTAGACTGAGGGCAAACCAAAGCGATGGGAAGCTGAACCTGTGGTGCAACAACGAGGGTGCAATTATGGTGGAGGCACAGACCCCTCTAAGAGTCTCCCAACTAGGGGACTTATCTCACTACAATGAATTCTTTGAGAAGCTGGTTTATAGGCCACCTTTTCATTCGAATTTCTCGAACATGCCTCTGGTTGCTGCTCAGGTGACAAAATTTGGATGTGGAGGGTATTCAATTGGGATTGGGACAAGCCACTCGCTATTTGACGGACCAGCAACTTATGAATTCCTGTGTGCATGGGCTTCTAAATCTGAAATTGTGAAAGGAAGTAAATGTGGTGGTGAGGTGGCAAAGCCAGCGCATGAGAGAGGGATACTGCTAAGTGAACATCTTGAAGCCCCAAAAGGTAATATGTCTATGAATATGCCTTCAAACTCAAGAAGCTTAAATCAACAGACAAAGGCAGTGGCAATAGATCATCTGTATCAGCTGATAATGCAAGCAGCTACTGAGCAGAAAGGCTTTCACGCCCAAATTGGAGGCTCCCGACAAAACAACTGCGTGCTTATGACCTATCACGTAAGCGCTGCACTCATAGATTTCTTGAGGAGGAAACACTTGTCTATGAGCACACATCTTCATTCCCTTCCACTCTCTACCTTCGAGGTTCTTGCATCTCACCTTTGGAAGGCAAGGACCAAAGCATTGGGAGTGGGGAAAGAAAAGAAGGTATGCTTGCAGTTCGCAGTGGATACGAGGAACAAGATGATGCCCCCATTGCCCAGAGGTTTTAGCGGGAACGCTTACGTTCTTGCCTCTGTAATCATGTCTGTTAGAGAACTGGAAGAGGCAAGCTATGAAGGGATCGTTGAGAAAATAAGAGAAGCCAAGAACAGCGTGAACCACGCCTATGTGAAAGCCTACGTGAAGGCCTTGGAATCGGGAGCACAGGGAAGCCTTCCTCCTTTGAAGGAGCTAACCTTGGTTTCTGATTGGACGAGGATGCCATTCCATAATGTTGGCTTCTTTCATAGAAAAGCAGCCTATGCTTCTCCTCTGGCCACTCCAATCCCACAGGTTGCTTACTTCATGCACAATCCTTCTAACAATGGAGGGGTTGATGTCAGAATTGGCTTAGACCCACAAACCGTAACTGCTTTTACCCACTACTTCTTACTCGAAGGCCAATAA 1455 0.4612 MSTAKHENYVSPSSSATVSISRVVPVYPKHVQALKVLNLSNLDRQCPTLMYLVFFYNPPQAFKDLTLSSVFSSLKSGLEETLSVWYPAAGRLRANQSDGKLNLWCNNEGAIMVEAQTPLRVSQLGDLSHYNEFFEKLVYRPPFHSNFSNMPLVAAQVTKFGCGGYSIGIGTSHSLFDGPATYEFLCAWASKSEIVKGSKCGGEVAKPAHERGILLSEHLEAPKGNMSMNMPSNSRSLNQQTKAVAIDHLYQLIMQAATEQKGFHAQIGGSRQNNCVLMTYHVSAALIDFLRRKHLSMSTHLHSLPLSTFEVLASHLWKARTKALGVGKEKKVCLQFAVDTRNKMMPPLPRGFSGNAYVLASVIMSVRELEEASYEGIVEKIREAKNSVNHAYVKAYVKALESGAQGSLPPLKELTLVSDWTRMPFHNVGFFHRKAAYASPLATPIPQVAYFMHNPSNNGGVDVRIGLDPQTVTAFTHYFLLEGQ 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0509 484 Gene3D - 13 225 IPR023213 -
Dere04g0509 484 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 451 - -
Dere04g0509 484 Gene3D - 255 480 IPR023213 -
Dere04g0509 484 Pfam Transferase family 25 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0509 Dere-ChrDere04 5178217 5180561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0509 40 482 Monolignol Biosynthesis Gene Families AT5G48930 23.340 1.72e-29 118