Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0505 ATGAGACCTGCTGACACGCGAAAGTCACGTGAGCAATCGAACCTGAAAATTCAAAGGCGGATGCCAACTCCCAAATTTAACCCAAATTCAGGAACCCGCCAAATCCGAGTTTCGCTTCGCTGGATTCTCCGTTTTAACGCGCAAAACACAAAATTACTGGTGGAGGGCTGCCGAAGATCTAGAGGAAGGGACCCAAGTGCAGCACCGATGGCGTCCGTGGATAAAGAGCTCGAAGAGCAGCTACTCGAAGCTGGAAATAAGCTCGCAGATCCTCCGTCATCTGTCGACGAGCTCCTGTCACTTCTTGATCAAATTGAGAGTTGCCTATCAAGAGTTGAACAGTCACCCACCAAATCAATGCAAAATGCTCTTTCACCATCATTGAAAGCGTTAATTGCTGATAATTTTTTGAGGCATTCAGATGATGATGTGAAAGTTGCAGTAGCCTCTTGCATCACTGAAATAACAAGAATAACTGCACCTGATGCTCCTTATGATGATGACCAAATGAAGGAGGTGTTTCAATTAATTGTATCTTCTTTTGAAAATCTATATGATAAGTCAAGCCGATCATATGCTAAGAGAACATCCATTCTTGTAACTGTTGCAAAGGTCAGATCGTGTGTGGTGATGCTGGATCTTGAGTGTGATGCCCTGATTTTAGAGATGTTTCAGCATTTCTTCAAGGCTGTCAGGGAACATCATTCAGAGAATGTTCTATCATCCATGGAGACTATTATGACCCTTGTTATAGAGGAAAGTGAAGATATAGCTCTGGACCTACTTTCTCCAATCTTAGCCAGCGTGAAGAAAGACAATGAGGAATTTTTGCCAAATGCTCGAACTCTAGGGGAGAGAGTCCTTGAAAGTTGTGCAACAAAGCTTAAACCCTACTTAGTGCAAGCAGTGAGCACCTTGGGTATATCTCTTGATGATTATAGTAAGGTACTTGCTTCTATATGCCAAGAGACATCTGGCAGCTTGGAGCAAAATGATGTATGTGCTTCCAGTGAAAATGTGGCAGATGAGAGCAAATCAACAAAAGCAATGTTGGGTGAGTCAATGCAGGCGATTGAAGAAGATACTAAAAAAGCTCTCCCTCCTCAACAAGTTACTCTTGTTGATGGTAGGTGTCCCAAGTCTGTCATGAGCAATGGCATTGTACAGGCTGGTGAAGATGACTTTTTGGCAGATCCAAAGTCCCTAAAAAAGCAAGATGTAAATCATTCTGGTTACTCCAAAGGTATGAATATATCAGGTAATGAGGGTCCCAATACTGTTGACACTGGAAAAGTTGACAAAACAGAACAAAAGCCAGAACAAACCACCAAGAGGAGAGGAAAGCAATCCAATTCTTCAAAAAAATTGGCAGAACCTTCTGAGGGTTTAGCTGTTGCTCGTAACAGGGAAGCTGAGAAAATGCTTGACTCTAAAAGTCACAGCAAGAACATTCCTAGTTCATCTCATGAGGACCATTCTGCTGAGGTAGCAGGACCTTCAATGAACGACAGGGAGAGTGATGCTAAGGTTTCATCACGAAAGACAGTAAATGATGAGTCTGAAGTTGTTGCTTCTGCTTCTGCCCCTGGTGATAATCTTTCAAAAAAATCTGGAAGAGCAAAGAAGAAAGAAAGGCCCGCCAAAGAAGTGGTAATTTCCTCAGATGATGTTTCCAAAAAGGTGCCAGAAGGAACAAGTGATTCAGAAGCAAAAGCTACCAAGAGGTCAGCCAAAAAGGCACTTGCTAAGAGCTCTGATGCGAAAAAAACTAATGTGGTGGATTCAATAAAAAGCACAAGTGGGAATACAAGTGATAAGGAGGGTAAAAGGCAGTCAGCTAAGAAAGTAGATGAAAGCAATAAGGGTGGTGGATCCTCTTCAAAGCAGCCAGAGGAAAAGAAAAGGCAGAAGCGGGGGAAAGCCTCTGATTTGGTTGTAACAAAATCAGCTGAAGATGAAGAAAAGGAAACAGTGTCTTCACCAAAGTCAGGTATGAGGTTGACTAAAGACAAAAAGCATTCAGAGGAGACTCCTAAGACCAATTTGAAGAGGAAACGCACTTCAGGAAAAGAAAATGAGTCTGATATCAAGGAATATGGTGAAAATCTTGTTGGTTCACGTGTTAAAGTTTGGTGGCCAAAAGATCGTATGTTTTATGATGGTGTCATCGATTCTTTTGATTCTGCCAAAAAGAAGCACAAGGTCATGTACGATGATGGTGATAAAGAAATATTGAATCTTAGAAAGGAAAAATGGGAGTTTATTGAAGTTGACTCTGATTCTCAAGAGGAAGAAGGAAGTGATCACGCAAGCCCCGTTGCTTCAGCTGATATGCCCCCAAAGAAGAAAGGGAAAACGAGTGCTGCTGAGTCAACTAAGCAAACAAAGAAGGAAGCTTCTTCCAAGAGTGGTGGAGGAGCTGCATCCTGTAAATCTAAGGGTGCATCCACAAAGTCCAGCCATAAATCCAAAGAGGGCAGCAAAGTTGGTGGCAAATCCAAAGATTCCAAGAGTCTTGGCAAATCAGAGGATGAAATTAGCAGAAAATCTAGAGATCACGCTTCCAAAAGTGGTTCTGGTAGATCTATTGATGCTGCACCAAAGATGACTAAATCCAAGAACAATGACATTCCCAAGACCAACAAATCAAAGGATGACAATGTTAGCACACCAAAGTTTTCTGCTAGGTCTAAGCAAGAAACCCCAAAAAAATCCAAGCAAGAAACATCTACCATTCCTGCCACCAAGGGGAAAACCCCCAAAAGTGGTGGGAAGTCTAATGTTAATGGCACTGGCAAGGTGAAATCCAGTTCATCAAAGGCAAAAGATGCGGAGAATGAGTATTCGGCGGATTCAACAAAAGAGATAAAAGATACCAAGGGTAAGACGTCAGGTTTATCCAAGGCTCAAGGAAGTGCTACCAAGGCGGGAAAGAAGCGTCGAAGAGGCTAG 2952 0.4245 MRPADTRKSREQSNLKIQRRMPTPKFNPNSGTRQIRVSLRWILRFNAQNTKLLVEGCRRSRGRDPSAAPMASVDKELEEQLLEAGNKLADPPSSVDELLSLLDQIESCLSRVEQSPTKSMQNALSPSLKALIADNFLRHSDDDVKVAVASCITEITRITAPDAPYDDDQMKEVFQLIVSSFENLYDKSSRSYAKRTSILVTVAKVRSCVVMLDLECDALILEMFQHFFKAVREHHSENVLSSMETIMTLVIEESEDIALDLLSPILASVKKDNEEFLPNARTLGERVLESCATKLKPYLVQAVSTLGISLDDYSKVLASICQETSGSLEQNDVCASSENVADESKSTKAMLGESMQAIEEDTKKALPPQQVTLVDGRCPKSVMSNGIVQAGEDDFLADPKSLKKQDVNHSGYSKGMNISGNEGPNTVDTGKVDKTEQKPEQTTKRRGKQSNSSKKLAEPSEGLAVARNREAEKMLDSKSHSKNIPSSSHEDHSAEVAGPSMNDRESDAKVSSRKTVNDESEVVASASAPGDNLSKKSGRAKKKERPAKEVVISSDDVSKKVPEGTSDSEAKATKRSAKKALAKSSDAKKTNVVDSIKSTSGNTSDKEGKRQSAKKVDESNKGGGSSSKQPEEKKRQKRGKASDLVVTKSAEDEEKETVSSPKSGMRLTKDKKHSEETPKTNLKRKRTSGKENESDIKEYGENLVGSRVKVWWPKDRMFYDGVIDSFDSAKKKHKVMYDDGDKEILNLRKEKWEFIEVDSDSQEEEGSDHASPVASADMPPKKKGKTSAAESTKQTKKEASSKSGGGAASCKSKGASTKSSHKSKEGSKVGGKSKDSKSLGKSEDEISRKSRDHASKSGSGRSIDAAPKMTKSKNNDIPKTNKSKDDNVSTPKFSARSKQETPKKSKQETSTIPATKGKTPKSGGKSNVNGTGKVKSSSSKAKDAENEYSADSTKEIKDTKGKTSGLSKAQGSATKAGKKRRRG 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0505 983 MobiDBLite consensus disorder prediction 1 15 - -
Dere04g0505 983 SUPERFAMILY Tudor/PWWP/MBT 702 742 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 535 585 - -
Dere04g0505 983 FunFam Binding protein 699 751 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 603 617 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 938 962 - -
Dere04g0505 983 CDD Tudor_Agenet_AtEML-like 704 754 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 16 31 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 783 797 - -
Dere04g0505 983 Gene3D - 700 751 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 408 428 - -
Dere04g0505 983 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 75 328 IPR039776 GO:0007064
Dere04g0505 983 MobiDBLite consensus disorder prediction 588 602 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 906 937 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 627 697 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 465 489 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 875 905 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 406 697 - -
Dere04g0505 983 SUPERFAMILY ARM repeat 107 328 IPR016024 -
Dere04g0505 983 MobiDBLite consensus disorder prediction 798 816 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 818 858 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 1 31 - -
Dere04g0505 983 Pfam Sister chromatid cohesion protein PDS5 protein 96 301 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 758 983 - -
Dere04g0505 983 MobiDBLite consensus disorder prediction 429 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0505 Dere-ChrDere04 5094210 5102126 Dispersed/Wgd