Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0490 ATGGGGATTTACCTCAGCACTCCCAAAACTGAAAAGTTTTCTGAAGATGGTGAGAATGACCGTCTTAGATATGGTTTATCATCCATGCAAGGGTGGCGTGCAACAATGGAAGATGCTCACGCTGCATTTCCTGATCTGGATGCGTCCACTTCATTTTTTGGTGTTTATGATGGACATGGAGGGAAGGTGGTTGCGAAGTTTTGTGCCAAGTATCTTCACCAGCAGGTGCTCATGAGTGAAGCATATCAAGCTGGGGATATAGGAACCTCTCTTCAGAAAGCCTTTTTAAGAATGGATGAGATGATGCGCGGTCAAAGGGGATGGAGGGAATTAGCAGTCTTGGGCGACAAGACGAACAAGTTTTCTCGGATGATAGAAGGTTTGATTTGGTCTCCGAGAAGCAGTGACAGCCATGATCATGTTGATGATTGGGCTTTTGATGAGGGGCCTCATTCTGATTTTCCTGGACCAACTTCAGGAAGCACTGCCTGTGTTGCAGTTATTAGAAACAATCAATTGGTTGTTGCAAATGCTGGTGATTCACGTTGTGTGATATCTAGAAATGGTCAGGCATACAACTTGTCTAGAGATCACAAGCCTGATCTTGAAGCTGAGAAGGATAGAATTTTAAAAGCTGGTGGTTTTATTCATGCTGGACGAGTTAATGGCAGTTTAAATCTTGCAAGAGCTATAGGTGACATGGAATTTAAACAGAACAAATTTCTGCCTGCTGAAAAACAAATTGTGACTGCCAATCCAGATGTAAACACTGTTGAGCTATGTGATGATGACGAATTTATAGTACTAGCGTGTGATGGCATATGGGATTGCATGTCAAGCCAGCAGTTGGTAGATTTTGTGCATGATCAACTGCGCTCGGAAACTAAACTTTCTGCGGTGTGTGAGAGAGTGCTTGATCGGTGTTTGGCGCCATCAACTGCCGGCGGCGAGGGATGTGATAACATGACGATGATATTGGTGCAGTTCAAAAAACCCGCACAGTCGTCTGAAGCTAATACGGATAGACGCTAA 1032 0.4409 MGIYLSTPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAFPDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLMSEAYQAGDIGTSLQKAFLRMDEMMRGQRGWRELAVLGDKTNKFSRMIEGLIWSPRSSDSHDHVDDWAFDEGPHSDFPGPTSGSTACVAVIRNNQLVVANAGDSRCVISRNGQAYNLSRDHKPDLEAEKDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDVNTVELCDDDEFIVLACDGIWDCMSSQQLVDFVHDQLRSETKLSAVCERVLDRCLAPSTAGGEGCDNMTMILVQFKKPAQSSEANTDRR 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0490 343 SMART PP2C_SIG_2 28 329 IPR001932 -
Dere04g0490 343 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Dere04g0490 343 SMART PP2C_4 13 327 IPR001932 -
Dere04g0490 343 CDD PP2Cc 23 329 IPR001932 -
Dere04g0490 343 Gene3D - 1 330 IPR036457 -
Dere04g0490 343 Pfam Protein phosphatase 2C 156 313 IPR001932 -
Dere04g0490 343 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Dere04g0490 343 PANTHER PROTEIN PHOSPHATASE 2C 18 328 IPR015655 GO:0004722|GO:0006470
Dere04g0490 343 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Dere04g0490 343 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0490 Dere-ChrDere04 4935404 4939318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0490 1 343 PP2C-type Phosphatase Gene Family AT2G25070 77.259 0.0 581