Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0479 ATGGCGTTTCGCCTCTATTTTCTTCCTCAGAATGACCCCACTTATGTCATGATTACTTGGAATCGTTGGCACGCAAGAATAAGCTATACATACGCAATACAGCTTTTGTTTCTTCTTTTTCTCATATTGGTCAAGCAAATAGTATCCGGGAACCCAGAATATTCAAGCTGCAATATGGGCTATCTCAATTCAGTTTTGTCCTCTTCAAGCCAGGTTCATGCTGCTGAAGATGCCCCAGTGAGCGGCGGAGGCCTCAGTCAGAATGGTAAGTTCAGTTATGGATATGCTAGCTCCCCTGGCAAGAGATCTTCGATGGAAGATTTTTATGAGACAAGAATAGATGGTGTTGATGGTGAAATTGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGTGGTGCACGGGCTGCCGAATATGTCAAGCAAAACCTCTTCAGTAATTTGATCAGACACCCTAAGTTTATTTCTGACACCAAATCAGCTATTGCTGATGCATATAACCATACCGATTCTGAATTTCTCAAATCAGAAAATACTCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATCCTAGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGTAATGCCATTGCCGTATCACGAGATCATAAGCCAGACCAAACTGATGAGCGGCAAAGGATTGAAGATGCAGGGGGCTTTGTTATGTGGGCTGGAACTTGGAGGGTTGGTGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTCGCTGATCCAGAAATCCAGGAAGAAAAAGTTGACAGCTCCCTTGAGTTTCTCATATTGGCCAGTGATGGGCTATGGGATGTTGTCAGTAATGAGGAAGCTGTTGCTATGATAAAACCAATTGGGGATGCAGAGGCGGCAGCAAAGAGGCTGATGAATGAAGCATATCAAAGAGGTAGCTCTGACAATATCACTTGTGTAGTTGTTCGTTTCTTAATGAACCAAGGCGGCACTTCTTCTCGTAGTAGCTCGCGTCCTTCAGTAGAAGGGTAG 1074 0.4451 MAFRLYFLPQNDPTYVMITWNRWHARISYTYAIQLLFLLFLILVKQIVSGNPEYSSCNMGYLNSVLSSSSQVHAAEDAPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIRHPKFISDTKSAIADAYNHTDSEFLKSENTQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIGDAEAAAKRLMNEAYQRGSSDNITCVVVRFLMNQGGTSSRSSSRPSVEG 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0479 357 SMART PP2C_4 82 336 IPR001932 -
Dere04g0479 357 Pfam Protein phosphatase 2C 121 331 IPR001932 -
Dere04g0479 357 SMART PP2C_SIG_2 103 338 IPR001932 -
Dere04g0479 357 FunFam probable protein phosphatase 2C 59 84 342 - -
Dere04g0479 357 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Dere04g0479 357 CDD PP2Cc 91 338 IPR001932 -
Dere04g0479 357 PANTHER PROTEIN PHOSPHATASE 77 337 IPR015655 GO:0004722|GO:0006470
Dere04g0479 357 Gene3D - 84 342 IPR036457 -
Dere04g0479 357 ProSiteProfiles PPM-type phosphatase domain profile. 92 338 IPR001932 -
Dere04g0479 357 SUPERFAMILY PP2C-like 86 338 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0479 Dere-ChrDere04 4802490 4808758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0479 59 353 PP2C-type Phosphatase Gene Family AT4G31750 90.541 0.0 538