Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere04g0473 | ATGGTTTGTGAGATGGAGAATGACTCTCTCGAGGACATGGACATCGAAGTCCTTCCTTCGATGTGGCCTGAAGATATCGGAACTGATGCTGGTAAACAATTTAATATAGAAAAGCCAGGAAAGGACCAAGATATGTTGGAAGAGGTTACAATAATGGAGGAGACAACCATAGTTGATTTCAAGCGTCTCATGGAGCTCACAAATTATACAGATAAAGGGTCTTCTCAGCTGTCCTACCTTATGAAACACTGGGAATATAAGCAAGCCAATGCTGTGCGTCTTCTCAGAGAAGAACTCGACAACCTAAGCAAACAAAGGCGAGAGGTTGAGCTGAGGAAGTTGGAGATATTGGAGGAGCATAGATTTGAGGAAGAAATCTATGGGGATAAACGCCCAGTTTCTATTTTGGATGAAGTATATGATATATGGCAAGATGTAACATGCAGGAAATGTGATGTTATTGTTCAAAACAAGAGAATTGAGACAGATGCAGAGTATGATACAATTGTATATTGGAAACAGCGGGCCCTGAATCTGGAAAAATTGTTGGAAGCAAGTGTTGAGAGAGAGCAGATACTTTCACAGAAGTTGCAAGAATGCATAAAGAATCTTGAAAAGCAGTCCTCGCCTGTAGAAGAACTATCCCAGATTCTGAAAAGGGCAGATAATTTCTTACATTTTGTACTTCAGAATGCACCCGTTGTTATTGGTCATCAGGACAAAGAGTTGCGCTATCGCTTTATCTATAATCATTTTCCAAGTTTGCACGAGGAGGACATCATAGGAAAAACAGATGTAGAAATTTTCACAGGATCTGGTGTTAAAGAATCTCAAGATTTTAAGAGAGAAGTTCTAGAAAAAGGATTACCTGCAAAAAGGGAAATTACTTTTGAGACAGAATTATTTGGGTCAAAGACATTCCTGATTTATGTAGAACCTGTCTTCAGCAAGGCAGGGGAGACGCTTGGAATAAACTATATGGGAATGGATGTCACAGATCAGGTAAGAAAAAGAGAAAGGATGGCGAAGATTCGGGAAGAGATCGCAGTTCAGAAAGCCAAGGAAACAGAACTGAATAAAACTATTCACATTACAGAGGAGACTATGCGAGCAAAACAAATGTTGGCAACCATGTCTCATGAGATAAGATCTCCATTGTCTGGGGTCGTTAGCATGGCTGAAATTCTTTCTAGGACAAAGCTTGATCGGGAGCAAAGACAGCACTTGGATGTCATGCTTTCTTCAGGAGACTTGGTTCTTCAGCTTATAAATGACATACTTGATCTTTCCAAGGTTGAGTCAGGAGTTATGAAGTTGGAAGCAACCAAATTCCGGCCAAGAGAGGTAGTTAAGCATGTACTCCAGACTGCTGCAGCTTCACTGCAGAAAACATTAACATTAGAAGGACATGTAGCAGATGATGTACCTATTGAGGTTGTTGGAGATGTTCTAAGGATTCGGCAAATTCTCACAAATTTAGTCAGCAACGCAATCAAGTTTACTCATGAAGGCAAAGTTGGTATAAAACTTTACGTTGTGCCACAGCCATCTTTTGCAAAAGCCGAAGAAAGCCTCCAAAAGACTGGTTCAGACCAGTCAAGCATTTCAGGGAATGGGGTCAAAGAAGAGAAATATCTCCCAACTTTCCAAAATAACAGTAACCATAGTCGTGCATTGCGTAATGATGGTAGATCTCCAATTAAAAGTGAATGCTCAGTGAATAGAAATACTGAGGAGCAACATCACTCAGTTGAAACAACAGTGTGGATACGTTGTGATGTCTATGACACAGGAATTGGAATACCAGAGAAGGCTATTCCTACTTTATTTAAAAAGTACATGCAAGTCAGTGCAGACCATGCTCGAAAGTATGGTGGCACTGGGCTAGGACTAGCAATATGCAAACAATTGGTTGAATTAATGGGTGGTCGTCTTACGGTGTCTAGCAAAGAACACTCTGGTTCTACATTCACTTTCATACTGCCATGCAAGGTTTCGGCTGTTTGTAATCATTCTGATGACTCTGATGAGCTCTCAGATGCTGAGGATACCGATGCTACATCTGATGATACCACAGAGGGCTTCTTCCAATTCCAACCACCAACTTTGGGCTCTCTGTTTTCCTCCTATGGATCTAGCAGGACCCAGAAGTTATTACCTCAAGATCTTGGGTATACAACCTCGCTTAAATTCAATGGGCTTTCACAAACTTCATTCTCAATCCCATCTGATAACGTCAAATCTAAAGGAATAACTTCAGTTGAGGATGCATCCTCAGTAATCGATGGCCCAGAGATATCTGAGTCTGCATGTTCCTCGAGTCACAGCCCAGAAACAGAGAGCGAAAATATAGTTGCAAGAAACAAATCGCAAAATAGCAGCGCTGATTCCTCATATCATACGCAGGCAGGTAGAGATCGTGTAGCTGCAGTAACAGAGTCAAGCGAACCCCAACAAGCACGTCACAGTCAAAAAAGGGCAGAGAAATGCGTCACCAGCGGCGGTACATCAGAAGTAGCCAAACCAGATACAAAGCCAAAAATCCTTCTTGTTGAGGATAACAAGATCAATGTCATGGTGACACAGTCAATGATGAGACAGTTAGGTCATAGCATAGATGTTGTGAATAATGGAGTGGAAGCAGTGCGTGCAGTTCAGCGCCAGAGTTATGACCTGATTTTAATGGATGTGTGCATGCCAGTTATGAATGGTCTGCAAGCAACAAAACTGATTCGTTCTTTTGAAGAAACAGGCAACTGGGATGCGGCAAGAAGAGCTGGAATCGAGCCAAGTCTGCCAGCTTCAGGTTTGCATAAGCTGAGCCGGATCCCCATTATTGCGATGACAGCAAATGCTTTGTCAGAGAGTGCTGAAGAGTGTTTTGCAAATGGTATGGACTCATTTGTGTCAAAACCTGTGACTTTCCAAAAGTTGAACGAATGCCTTGAACAGTACTTTCAGTGA | 2964 | 0.4184 | MVCEMENDSLEDMDIEVLPSMWPEDIGTDAGKQFNIEKPGKDQDMLEEVTIMEETTIVDFKRLMELTNYTDKGSSQLSYLMKHWEYKQANAVRLLREELDNLSKQRREVELRKLEILEEHRFEEEIYGDKRPVSILDEVYDIWQDVTCRKCDVIVQNKRIETDAEYDTIVYWKQRALNLEKLLEASVEREQILSQKLQECIKNLEKQSSPVEELSQILKRADNFLHFVLQNAPVVIGHQDKELRYRFIYNHFPSLHEEDIIGKTDVEIFTGSGVKESQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETLGINYMGMDVTDQVRKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSRTKLDREQRQHLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKTLTLEGHVADDVPIEVVGDVLRIRQILTNLVSNAIKFTHEGKVGIKLYVVPQPSFAKAEESLQKTGSDQSSISGNGVKEEKYLPTFQNNSNHSRALRNDGRSPIKSECSVNRNTEEQHHSVETTVWIRCDVYDTGIGIPEKAIPTLFKKYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHSGSTFTFILPCKVSAVCNHSDDSDELSDAEDTDATSDDTTEGFFQFQPPTLGSLFSSYGSSRTQKLLPQDLGYTTSLKFNGLSQTSFSIPSDNVKSKGITSVEDASSVIDGPEISESACSSSHSPETESENIVARNKSQNSSADSSYHTQAGRDRVAAVTESSEPQQARHSQKRAEKCVTSGGTSEVAKPDTKPKILLVEDNKINVMVTQSMMRQLGHSIDVVNNGVEAVRAVQRQSYDLILMDVCMPVMNGLQATKLIRSFEETGNWDAARRAGIEPSLPASGLHKLSRIPIIAMTANALSESAEECFANGMDSFVSKPVTFQKLNECLEQYFQ | 987 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere04g0473 | 987 | Gene3D | - | 436 | 669 | IPR036890 | - | |
Dere04g0473 | 987 | SUPERFAMILY | CheY-like | 845 | 987 | IPR011006 | - | |
Dere04g0473 | 987 | CDD | HATPase_EvgS-ArcB-TorS-like | 486 | 663 | - | - | |
Dere04g0473 | 987 | Coils | Coil | 92 | 119 | - | - | |
Dere04g0473 | 987 | PANTHER | TWO-COMPONENT HISTIDINE PROTEIN KINASE | 7 | 985 | - | - | |
Dere04g0473 | 987 | CDD | HisKA | 369 | 431 | IPR003661 | GO:0000155|GO:0007165 | |
Dere04g0473 | 987 | FunFam | Histidine kinase 5 | 212 | 347 | - | - | |
Dere04g0473 | 987 | PRINTS | Bacterial sensor protein C-terminal signature | 590 | 604 | IPR004358 | GO:0016310|GO:0016772 | |
Dere04g0473 | 987 | PRINTS | Bacterial sensor protein C-terminal signature | 649 | 662 | IPR004358 | GO:0016310|GO:0016772 | |
Dere04g0473 | 987 | PRINTS | Bacterial sensor protein C-terminal signature | 625 | 643 | IPR004358 | GO:0016310|GO:0016772 | |
Dere04g0473 | 987 | ProSiteProfiles | Response regulatory domain profile. | 847 | 986 | IPR001789 | GO:0000160 | |
Dere04g0473 | 987 | SMART | REC_2 | 846 | 982 | IPR001789 | GO:0000160 | |
Dere04g0473 | 987 | Pfam | Response regulator receiver domain | 848 | 915 | IPR001789 | GO:0000160 | |
Dere04g0473 | 987 | ProSiteProfiles | Histidine kinase domain profile. | 377 | 665 | IPR005467 | - | |
Dere04g0473 | 987 | CDD | REC_hyHK_CKI1_RcsC-like | 848 | 982 | - | - | |
Dere04g0473 | 987 | Pfam | His Kinase A (phospho-acceptor) domain | 372 | 435 | IPR003661 | GO:0000155|GO:0007165 | |
Dere04g0473 | 987 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 424 | 663 | IPR036890 | - | |
Dere04g0473 | 987 | MobiDBLite | consensus disorder prediction | 757 | 843 | - | - | |
Dere04g0473 | 987 | Gene3D | PAS domain | 209 | 347 | - | - | |
Dere04g0473 | 987 | MobiDBLite | consensus disorder prediction | 546 | 578 | - | - | |
Dere04g0473 | 987 | MobiDBLite | consensus disorder prediction | 765 | 801 | - | - | |
Dere04g0473 | 987 | FunFam | Putative histidine kinase 5 | 358 | 435 | - | - | |
Dere04g0473 | 987 | Gene3D | - | 358 | 435 | - | - | |
Dere04g0473 | 987 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 481 | 662 | IPR003594 | - | |
Dere04g0473 | 987 | SMART | HKATPase_4 | 481 | 665 | IPR003594 | - | |
Dere04g0473 | 987 | FunFam | Histidine kinase 5 | 840 | 987 | - | - | |
Dere04g0473 | 987 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 369 | 435 | IPR036097 | GO:0000155|GO:0007165 | |
Dere04g0473 | 987 | Coils | Coil | 187 | 207 | - | - | |
Dere04g0473 | 987 | MobiDBLite | consensus disorder prediction | 546 | 560 | - | - | |
Dere04g0473 | 987 | SMART | HisKA_10 | 370 | 435 | IPR003661 | GO:0000155|GO:0007165 | |
Dere04g0473 | 987 | FunFam | Probable histidine kinase 1 | 556 | 668 | - | - | |
Dere04g0473 | 987 | MobiDBLite | consensus disorder prediction | 674 | 699 | - | - | |
Dere04g0473 | 987 | Gene3D | - | 839 | 986 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere04g0473 | Dere-ChrDere04 | 4771675 | 4776272 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere04g0473 | 1 | 987 | Histidine Kinase Gene Family | AT5G10720 | 59.013 | 0.0 | 1138 |