Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0454 ATGACTCCCAAGAAGATTACATGGAAGTCCATCATCTTGATTTTCCTTTGTTACAAGACTAAATGCTCATTGAAGGAATCCAAAAAGAAGATTTTCCGAGAAGGCTCTTTTCGGAGACTATGCCTCTCAGATATTAGCATTTCAAGCTCTCCTCAGGTCATTGATGATCTTTCCATCTCCCTCGTTGGCTCAAAACTTCATACGTTCACCCTAGAAGAGCTGAGAGAGGCGACACATAATTTCTCTTGGAGCAATCTGATAGGTGAAGGTGGGTTTGGACCTGTGTTCAAGGGTTTTGTTGATGACAAGCTTAGACCCGGTTTGAAGGCTCAGCCTGTGGCTGTGAAACGACTAGACTTGGATGGCTTGCAGGGTCATAGGGAGTGGCTGGCAGAGATAATCTTTCTAGGACAGCTAAGGCATCCACATCTTGTTAACTTAATTGGATACTGTTACGACGAGGAACACAGGCTTTTGGTGTATGAACACATGGCAAGAGGCAGCTTGGAGCACCAACTCTTTAGAAGATACTCTGCCGCCATGCCATGGTCAACCAGGATGAAAATTGCACTGGGAGCAGCTAAGGGCCTAGCCTTCCTTCATGAAGCAGACAAACCCGTAATATATAGGGATTTCAAAACTTCAAACATCTTACTAGACTCGGATTATACGGCTAAACTGTCAGACTTCGGGCTAGCAAAGGATGGACCTGAAGGGGAAGACACACATGTAACAACACGCGTCATGGGGACACAGGGCTATGCTGCACCTGAGTACATCATGACAGGTCACCTTACAACCAAGAGCGACGTGTATAGCTATGGAGTGGTTCTATTAGAATTGATAACAGGAAAAAGGGTGGTGGATAAGAGCAGGCCAAACAGAGAGCAGAGCCTAGTGGAATGGGCAAGGCCTCTGTTGAGGGATCAGAGAAAGATTCACCGCCTCATAGACCCTAGACTGGAAGGTCAATTTCCTATCAAAGGGGCTCACAAAGTCGCTGCCTTGGCTTACAAGTGCTTGAGCCACCACCCAAACCCAAGGCCCACTGTGTGTGATGTGGTCAACATATTAGAGCCACTTCAGTACTTTGATGATTTAGTCGTTGAACCCTTTGTGTACGTAGCCGTCAATTAA 1137 0.4626 MTPKKITWKSIILIFLCYKTKCSLKESKKKIFREGSFRRLCLSDISISSSPQVIDDLSISLVGSKLHTFTLEELREATHNFSWSNLIGEGGFGPVFKGFVDDKLRPGLKAQPVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVNLIGYCYDEEHRLLVYEHMARGSLEHQLFRRYSAAMPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGEDTHVTTRVMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELITGKRVVDKSRPNREQSLVEWARPLLRDQRKIHRLIDPRLEGQFPIKGAHKVAALAYKCLSHHPNPRPTVCDVVNILEPLQYFDDLVVEPFVYVAVN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0454 378 ProSiteProfiles Protein kinase domain profile. 81 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0454 378 SUPERFAMILY Protein kinase-like (PK-like) 56 362 IPR011009 -
Dere04g0454 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Dere04g0454 378 FunFam Serine/threonine-protein kinase BIK1 48 163 - -
Dere04g0454 378 CDD STKc_IRAK 87 361 - -
Dere04g0454 378 Gene3D Transferase(Phosphotransferase) domain 1 164 367 - -
Dere04g0454 378 Gene3D Phosphorylase Kinase; domain 1 45 163 - -
Dere04g0454 378 PANTHER OS01G0588500 PROTEIN-RELATED 50 362 - -
Dere04g0454 378 Pfam Protein kinase domain 85 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0454 378 FunFam Probable serine/threonine-protein kinase PBL8 164 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0454 Dere-ChrDere04 4586503 4587906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0454 67 358 Glycoside Hydrolase AT3G07070 55.254 1.84e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dere04g0454 Pkinase 6.4e-46 CL0016