Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0439 ATGGGAGATCCCAGGGTGGTTGTTCCGTACCATGATCCACATGATGATGATACACTCCCCACCAACATTATTCTTAATTTCGGCAAGGATCCTAGTCCGACGCTTCTTGATTCATCCAATAACGCAAAGTTTTCCTACTCTTCCTCAGTACTGCCCCATCTAGATGATGCAAATTTAGTGGGCAATATTGATCCATATTCAGATCCAATGATGTTTTCCATTGGAGGATCAGGGAACTTCGAGGCAGGTCCTTCAGAATTTCACCGGCAAAATCATCCAGTACATCAGAGTTTGAGTGCAGCGTTTTGGCAAGACTTACCAATCCCATTTACTTGCACTTTCTGTCTAGTGCTTCGTGAAATAGTTCATAGTAATGGTATTGATTTTACCAAACTTCAGATTCACGGCACCCTCGGACTGATCTCTCATGCAATTCATTATCACAATACTTCTGTGGGTTCGTCGGCCAATTGTCCATTTCAAATCTTCGATTTTTCCAAGAAGAGCGTAGATCAAATCAAGGTTTTTCTAATCCAGTACTGCCTGAACCAAAATTCAACGGGCTACTATATCGTGCAAGATCCGCTTTCTTCTTATTATGAAGCCCTATGCAGTGGATTGGATTGGACCGAAGACTCCAATGATGACCTCGGTGACCTTAACCTTGATAATTCAGGAGGAAAATCTGCCACGGAACAAGAGGTAGAGGCGGGGAATGTGATGGAAAGAATTCATAAAAATTGCCTTGCGGAACAGAGGGAGAGAGCCGGAAAGATGAAGTTGAGTGATTTGAGAGATTACTTCAGTCTACCTATTGAAAAAGCAGCCAAGAGATTAAACTTATGCCCCACTGTGGTGAAGAAAATATGTCGCAAAGAAGGATTGCGACGATGGCCTCACAGAAAGGTGAAAAGCATAGTGAAGCAAATATCGATATTGAGAAGGGCTTTAGAATCAGAAGACGGAGCGTCAAGAAGGGCACCAACTGAAGCGGAAATTGAGAGACTTGAACAGGAAATGATTCGGCACTGCGGTGGATTCGCCCCAACTTCACTTAATTTCGAATGA 1068 0.4316 MGDPRVVVPYHDPHDDDTLPTNIILNFGKDPSPTLLDSSNNAKFSYSSSVLPHLDDANLVGNIDPYSDPMMFSIGGSGNFEAGPSEFHRQNHPVHQSLSAAFWQDLPIPFTCTFCLVLREIVHSNGIDFTKLQIHGTLGLISHAIHYHNTSVGSSANCPFQIFDFSKKSVDQIKVFLIQYCLNQNSTGYYIVQDPLSSYYEALCSGLDWTEDSNDDLGDLNLDNSGGKSATEQEVEAGNVMERIHKNCLAEQRERAGKMKLSDLRDYFSLPIEKAAKRLNLCPTVVKKICRKEGLRRWPHRKVKSIVKQISILRRALESEDGASRRAPTEAEIERLEQEMIRHCGGFAPTSLNFE 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0439 355 ProSiteProfiles RWP-RK domain profile. 246 326 IPR003035 -
Dere04g0439 355 PANTHER PROTEIN RKD4 100 340 IPR044607 GO:0003700
Dere04g0439 355 Pfam RWP-RK domain 259 306 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0439 Dere-ChrDere04 4425745 4427419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0439 259 323 NLP Transcription Factor Family AT4G24020 43.077 2.75e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Dere04g0439 RWP-RK 3.5e-21 No_clan