Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0436 ATGAGTTTAAGTGCAGCCGAGGATGGTACATCTTCAGAAATTCAAATCCCAGCTGAGATTGATTGGCATATGCTTGACAAGTCCAAATTCTTCTTCCTTGGCGCCGCTTTATTTTCCGGTGTATCAGCTGGGCTTTATCCCATAGTTGTGTTGAAAACCCGTCTGCAGGTCTCTTCGACACAGATTTCTTGTTTAAATTTGTCTTTTGCCATTATGCGCTGTGAAGGTTTCAGAGGGTTTTATAAAGGTTTTGGCACTTCTTTGATGGGGACAATCCCTGCTCGAGCGCTCTACATGGGAGCCCTCGAAGTTACCAAGAGTAATGTTGGCACTGCTACTGTTGAATTGGGGTTTTCAGATACTACGGCCACCGCCATAGCTAATGCTTCTGCAGGATTCACTTCTGCTATGGCTGCACAATTAGTTTGGACCCCAGTTGATGTGGTGAGCCAAAGACTGATGGTTCAAGGCCGCAATAGCAGTGCAAATATACTCCCCAGCGTTAATTCTGGGAATTACAGGAATGGTGTTGATGCGTTCAGGAAAATTCTGTGTGCAGATGGAGTGAGAGGATTGTACAGAGGATTTGGGATTTCAATATTGACTTATGCACCATCCAATGCGGTTTGGTGGACTTCTTACTCAATGGTCCACAGGCTCATGTGGGGTGCTTTTGGTTGCTATATGGGAAGGAGGGATGAGAGTAATTTGACGAATGGGTGTGGTTTTAGGCCTGATTCCAAGGCAATGGTAGCAGTTCAAGGCTTGAGTGCGGTTATGGCCAGTGGGGTGTCAGCTATCATAACTATGCCACTTGACACTATCAAGACAAGGATGCAGGTCTTGGATGCAGAGGATAATGGACGAAGGAGACCATTAACTTTTGTGCAGACAGTTAAAAATTTAGTGAAGGAAGGTGGTCTCCTTGCTTGTTACAGAGGATTGGGTCCAAGGTGGGCTTCAATGTCTGTGTCTGCAACAACCATGATTACTACCTATGAGTTTTTGAAACGAATGTCTACCAAGAACCAAGATAAAATAACTGCGTAA 1050 0.4486 MSLSAAEDGTSSEIQIPAEIDWHMLDKSKFFFLGAALFSGVSAGLYPIVVLKTRLQVSSTQISCLNLSFAIMRCEGFRGFYKGFGTSLMGTIPARALYMGALEVTKSNVGTATVELGFSDTTATAIANASAGFTSAMAAQLVWTPVDVVSQRLMVQGRNSSANILPSVNSGNYRNGVDAFRKILCADGVRGLYRGFGISILTYAPSNAVWWTSYSMVHRLMWGAFGCYMGRRDESNLTNGCGFRPDSKAMVAVQGLSAVMASGVSAIITMPLDTIKTRMQVLDAEDNGRRRPLTFVQTVKNLVKEGGLLACYRGLGPRWASMSVSATTMITTYEFLKRMSTKNQDKITA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0436 349 Gene3D Mitochondrial carrier domain 30 348 IPR023395 -
Dere04g0436 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 339 IPR018108 -
Dere04g0436 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Dere04g0436 349 Pfam Mitochondrial carrier protein 252 343 IPR018108 -
Dere04g0436 349 Pfam Mitochondrial carrier protein 37 108 IPR018108 -
Dere04g0436 349 Pfam Mitochondrial carrier protein 124 222 IPR018108 -
Dere04g0436 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 11 345 - -
Dere04g0436 349 SUPERFAMILY Mitochondrial carrier 24 336 IPR023395 -
Dere04g0436 349 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Dere04g0436 349 PRINTS Mitochondrial carrier protein signature 40 58 IPR002067 GO:0055085
Dere04g0436 349 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Dere04g0436 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 220 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0436 Dere-ChrDere04 4393174 4394223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0436 1 345 Chloroplast and Mitochondria Gene Families AT1G72820 66.092 4.84e-162 455