Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0431 ATGGAGGAGATGTCGTCTGCGATTGCAGTGCCATTAAGAGTAGGTAATTCAGTTTGTGATAACCCAACCACAGCCACCAACATGGATGTATCCAGACTTAAGCTGATGGCAGATGCTGGGTTGTTATCTAATTCTATAACTAAGGTTTCAACTGAGACGGTTGCCGGTTCTGATGAGGATCATAATGGTCAGAATCTGGAGAATGAAGTTAGCATTACAGCAGTCACAGCACCAAAACTTGATAGGGAAGAAGAAATCCCTTTGTCGGATATGATATCCCAAAAAAACAGCACATCGGTTGCTGGTGATGAAGTTTTAACCCCAGAAATTGAGGATGATGATACGTTATCATTGGAGGGTGATCAGATCATTGACAGCTCTTGTTCTCTTTCGGTAGTCAGTGAGAACAGTAGCATATGTGGAGAGGAGTTAGTCAGTTTTGAGGCTACCTCTGAGATAGGGACACCAAGTTCCATTGACATAGAGAAGAGCATGTGTTCCAGGGCTGCTGATCTAGAGGAGTCTAGTGTTGAGGCAGAAATTGTGAGTGAACCCCTTGCTGTGGCAGTGAGCCTTGAAGAGTCTGCTGTCGGATCTGTCCCACAGCCTTCTGCAGTTGTTCTTCAGCTGCCTCTGGAAAAAGCGGTGAGTGGAACAGTTGGTCGTAGTGTTTTTGAATTAGATTATGCTCCACTCTGGGGATTCATTTCTATGTGTGGAAGACGACCTGAGATGGAAGATGCAGTTGCAACTGTGCCTCGATTTTTGAAAATTCCTATTCAAATGCTAATCAGTGATAGGGTACTTGATGGAATGAGCAAGCACTTGAGTCAGCAGACAATTCATTTCTTCGGAGTTTATGATGGTCATGGTGGCTCTCAGGTGGCAAATTATTGCCATGACCGTGTCCATTTGGCTTTGGCTGAGGAAATAGAATTTCTGAAGGAGGGTCTAATAAATGGAAGTATCAAGGATAGTTGTCAAGATCAGTGGAAAAAAGCTTTCACCAATTGTTTCTTAAAGGTTGATGCTGAAGTTGGAGGGAAAGTTAATGGTGAACCTGTTGCCCCAGAAACTGTTGGTTCCACTGCTGTTGTTGCTATTATCTGCGCATCTCATATCATTGTTGCTAACTGTGGTGATTCAAGAGCAGTTCTTTGTCGTGGCAAAGAACCTATGGCATTGTCTGTGGATCATAAACCAAACAGAGATGATGAATATGCAAGAATTGAAGCAGCTGGAGGCAAGGTGATACTATGGAATGGTCATCGTGTATTTGGTGTTCTTGCAATGTCTAGGTCTATTGGTGATAGATATTTGAAGCCATGGATTATTCCAGAACCCGAAGTTATGTTTCTTCCCCGTGCAAAAGACGATGAATGCCTCATTCTGGCCAGTGACGGTCTGTGGGATGTCATGACAAATGAAGAGGCATGTGACCTAGCTCGAAGACGAATACTTCTGTGGCACAAGAAAAATGGTGTTTCACTACCCTCTGAAAGGGGAGAGGAAGCTGATCCTGCTGCACAAGCAGCTGCAGAGTACCTGTGGAACCGTGCTCTCCAGAAAGGAAGCAAAGATAACATCACTGTGATTGTGGTGGATTTGAAAGCTCAAAGAAAATTTAAGAGCAAGACATGA 1641 0.4381 MEEMSSAIAVPLRVGNSVCDNPTTATNMDVSRLKLMADAGLLSNSITKVSTETVAGSDEDHNGQNLENEVSITAVTAPKLDREEEIPLSDMISQKNSTSVAGDEVLTPEIEDDDTLSLEGDQIIDSSCSLSVVSENSSICGEELVSFEATSEIGTPSSIDIEKSMCSRAADLEESSVEAEIVSEPLAVAVSLEESAVGSVPQPSAVVLQLPLEKAVSGTVGRSVFELDYAPLWGFISMCGRRPEMEDAVATVPRFLKIPIQMLISDRVLDGMSKHLSQQTIHFFGVYDGHGGSQVANYCHDRVHLALAEEIEFLKEGLINGSIKDSCQDQWKKAFTNCFLKVDAEVGGKVNGEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVILWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAKDDECLILASDGLWDVMTNEEACDLARRRILLWHKKNGVSLPSERGEEADPAAQAAAEYLWNRALQKGSKDNITVIVVDLKAQRKFKSKT 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0431 546 SUPERFAMILY PP2C-like 228 537 IPR036457 -
Dere04g0431 546 ProSitePatterns PPM-type phosphatase domain signature. 283 291 IPR000222 GO:0043169
Dere04g0431 546 SMART PP2C_4 218 534 IPR001932 -
Dere04g0431 546 Gene3D - 219 546 IPR036457 -
Dere04g0431 546 CDD PP2Cc 237 536 IPR001932 -
Dere04g0431 546 Pfam Protein phosphatase 2C 267 529 IPR001932 -
Dere04g0431 546 PANTHER PROTEIN PHOSPHATASE 171 536 IPR015655 GO:0004722|GO:0006470
Dere04g0431 546 FunFam Protein phosphatase 2C 16 220 546 - -
Dere04g0431 546 ProSiteProfiles PPM-type phosphatase domain profile. 232 536 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0431 Dere-ChrDere04 4371606 4375190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0431 1 546 PP2C-type Phosphatase Gene Family AT1G17550 49.556 2.65e-170 490