Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0413 ATGACTGCAGATGATGATGACCCAGGAAAAAGAAGTTCAAATTCAAGACAGGAATCAGTGAGGCCGTGTTCTTGGTTGACGAACTTTCACCGTGATCTGGTGGCCGGAGCGCTCATGGGTGGGGTGGTCCACACGATCGTGGCCCCAATTGAGAGGGCGAAGCTATTGTTGCAGACCCAAGAAAGCAATATGGCTATTGTTGTCAGTGGGCGTCGGAAATTCAAGGGCATGTTGGATTGTATAGTCCGTACTGTCAGAGAAGAAGGCATTCTCTCGTTGTGGAGAGGCAATGGCAGCAGTGTTCTTCGTTATTATCCTTCTGTCGCGCTCAATTTCTCGCTCAAGGATCTTTACAGAAACATATTAAGAAGTGGAAACTCTTGTGATAATAATTTTTTGGCTGGTGCATCCGCTAATTTTGTTGCTGGAGCTGGAGCCGGTTGTACAACGCTTGTCTTGGTATATCCTCTTGATATTGCACACACCCGCCTTGCTGCTGACATAGGACAAAAAGAGAAGCGTCAATTTCAGGGAATCTACCATTTCTTGGCCACCATATTTAAAACTGATGGGATTAGAGGGATCTACAGGGGCCTTCCTGCTTCTCTACATGGAATGGTAATACACCGAGGCATTTACTTCGGAGGCTTTGATACAATAAAAGAAAGGTTATCTGAAGAATCAGAAGCTAAGTTAGCGTTGTGGAAACGTTGGGTGGTGGCTCAGGCAGTGACAACATCAGCTGGGTTGATATCATATCCATTAGACACAGTTCGAAGGAGGATGATGATGCAGTCCGGCGTGGAGCACCCCGTCTACAACAGCACCCTCGACTGCTGGAGGAAAATATATCGGACAGAAGGATTTGTTTCATTTTACCGCGGTGCTCTCTCCAACATGTTCAGGAGCACCGGGGCTGCAGCTATATTAGTCTTGTACGACGAGTTCAAGAAATTTATGAATTGGGGTCCATTGTGA 978 0.4652 MTADDDDPGKRSSNSRQESVRPCSWLTNFHRDLVAGALMGGVVHTIVAPIERAKLLLQTQESNMAIVVSGRRKFKGMLDCIVRTVREEGILSLWRGNGSSVLRYYPSVALNFSLKDLYRNILRSGNSCDNNFLAGASANFVAGAGAGCTTLVLVYPLDIAHTRLAADIGQKEKRQFQGIYHFLATIFKTDGIRGIYRGLPASLHGMVIHRGIYFGGFDTIKERLSEESEAKLALWKRWVVAQAVTTSAGLISYPLDTVRRRMMMQSGVEHPVYNSTLDCWRKIYRTEGFVSFYRGALSNMFRSTGAAAILVLYDEFKKFMNWGPL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0413 325 PRINTS Adenine nucleotide translocator signature 134 147 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere04g0413 325 PRINTS Adenine nucleotide translocator signature 29 41 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere04g0413 325 PRINTS Adenine nucleotide translocator signature 107 119 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere04g0413 325 PRINTS Adenine nucleotide translocator signature 237 253 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere04g0413 325 PRINTS Adenine nucleotide translocator signature 74 95 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere04g0413 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 134 223 IPR018108 -
Dere04g0413 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 236 319 IPR018108 -
Dere04g0413 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 121 IPR018108 -
Dere04g0413 325 SUPERFAMILY Mitochondrial carrier 28 315 IPR023395 -
Dere04g0413 325 Gene3D Mitochondrial carrier domain 26 320 IPR023395 -
Dere04g0413 325 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 27 322 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere04g0413 325 PRINTS Mitochondrial carrier protein signature 196 214 IPR002067 GO:0055085
Dere04g0413 325 PRINTS Mitochondrial carrier protein signature 45 59 IPR002067 GO:0055085
Dere04g0413 325 PRINTS Mitochondrial carrier protein signature 96 116 IPR002067 GO:0055085
Dere04g0413 325 PRINTS Mitochondrial carrier protein signature 241 263 IPR002067 GO:0055085
Dere04g0413 325 PRINTS Mitochondrial carrier protein signature 32 45 IPR002067 GO:0055085
Dere04g0413 325 PRINTS Mitochondrial carrier protein signature 149 167 IPR002067 GO:0055085
Dere04g0413 325 FunFam probable ADP,ATP carrier protein At5g56450 31 322 - -
Dere04g0413 325 Pfam Mitochondrial carrier protein 233 321 IPR018108 -
Dere04g0413 325 Pfam Mitochondrial carrier protein 28 123 IPR018108 -
Dere04g0413 325 Pfam Mitochondrial carrier protein 137 226 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0413 Dere-ChrDere04 4254118 4258362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0413 29 322 Antiporters AT5G17400 39.073 2.44e-64 204