LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere04g0407	ATGGGCTGGGGGGCAAATCAACACTTCAAAAAGTGGAAGATAACTCGAATATGGGCAGGAGTATTTCTCGGTTGCATCTGCTTCCTATACTTCACTCCCAAAATCCCTCGCTCTCCCAACCACCACCACTTTTTTGACATGCGCAACCTTCTGGGGGTGCCCAATACTTTGAATGTGATCACAAATTTCCCTTTTTTGGTTGTTGGTGTTCTGGGCTTTGTTTTCGCTGTTGAAGGCGGCGTTTTAAACATAAGTTCTCAAGGAGAGGTTTGGGCTTGGGCGCTATATTATGCCGGAACAACAGGGGTAGCTTTTGGCTCTGCTTATTACCATTTGAAGCCGGATGATAATCGAGTTTTGTGGGACAATTTACCGATGATGGTGGCCTACGCGTCGCTTTTATCTTGTTTGGTTATTGAAAGAGTAGGCCAGAGGATTGGGTTATGTTGTCTGTTTGCACTTCTTTTTGCCGCCTTTCTTACTGTAGCTTATGAACGGATTTATAATGATATTAGGTTCTGCGTGATATTCCAATTGATTCTTCCTCTCGCTATTCCAGGAGTGGCATTTCTGTACCGCTCCAAATATACTCACTCAACATATTGGTTTTGGTCAGCGGGGATTCATCTGCTGGCAAAATTTGAAGCCGCTGCTGACAGGAAAATATACAATGCAAATAACTACGTTATCAGTGGACACTCTTTGGAACACTTGTGCTTAGCACTGATCCCAGTTTTACTTAGTGCAATGCTCATCTACAGGGAACCTAAGTTTCAAAGGTACTTGATTCTAAGTTCAACAATTGGGTACACTCAAAGATCGACCCTGACAAGGTGGATAGAATTGATGAAGGTGTTTATGTGCAATTGCTCCTTGATGCCTGAGATGCTCATACAAGCTCATCTTCCTGCTTTCTCCAGAGTGCCTACTGCTTCGGCTTCTCTTCCTGGATCCTACATTTTTGTTGCCATCCAAACGGATCCCAACATGGCAGACCAAGTCTACTCTTCTTCCAAGCCGAATTCCAACGGTACTACTGGCGCCGCCGCTGCTCCCGCCGCCGCCAACGGCAATCCCGGCCCTGTTAAATCCAACCTTTACAATCCCAACCGTCAAGTCTACCGCCCCCAGTCCCACTACCACCGTCGTCAGCGCTCCAACCGCAACATCTGCTGCTGCTGCTGCTTCTGGTCCATACTCGTCCTTCTCGGGCTCCTTCTGCTCGCCTCCATTGTCGGTGCTGCACTGTACGTCCTCTACCGCCCTCACCGTCCCCAATTCTCCATCACCAATCTTCGCATTGCCAAGATGAACCTCACTGCTTCCCCTGATTCCCCTTCGCATCTCACTACCCTTCTCAATCTCACTCTCATAGCCAAAAACCCCAACAACCATCTCGTTTTCTTCTACGACCCTTTCACTATCACGGCCTTCTCTGATGCCGTCCCAATCGGGAATGGGTCCCTTCCGGCCTTTACGTCCGACAAGAACAATCAGACCAGCCTCCGAGCGGTCCTCTCCGATGCTCGAGATCTGGATACTGACTCCTTGACTACTCTTAGATCAGGTCTGAAGAAGAAGAAGGGGTTCCCGGTGGAGATTCAGATGGACACGAAAGTAAAGTTGAAGATGGACTGGCTCAAGAGCAAGAAAGTGGGGATAAGAGTTACGTGTGTCGGAATCAAAGGGACGGTACCCAGCGGGAAGACTCCGTCGGTGGCTTCGGTCACTGACTCTGAGTGTAAGGTGGATCTTCGAATCAAGATCTGGAAGTTTTCTTTTTAG	1785	0.4829	MGWGANQHFKKWKITRIWAGVFLGCICFLYFTPKIPRSPNHHHFFDMRNLLGVPNTLNVITNFPFLVVGVLGFVFAVEGGVLNISSQGEVWAWALYYAGTTGVAFGSAYYHLKPDDNRVLWDNLPMMVAYASLLSCLVIERVGQRIGLCCLFALLFAAFLTVAYERIYNDIRFCVIFQLILPLAIPGVAFLYRSKYTHSTYWFWSAGIHLLAKFEAAADRKIYNANNYVISGHSLEHLCLALIPVLLSAMLIYREPKFQRYLILSSTIGYTQRSTLTRWIELMKVFMCNCSLMPEMLIQAHLPAFSRVPTASASLPGSYIFVAIQTDPNMADQVYSSSKPNSNGTTGAAAAPAAANGNPGPVKSNLYNPNRQVYRPQSHYHRRQRSNRNICCCCCFWSILVLLGLLLLASIVGAALYVLYRPHRPQFSITNLRIAKMNLTASPDSPSHLTTLLNLTLIAKNPNNHLVFFYDPFTITAFSDAVPIGNGSLPAFTSDKNNQTSLRAVLSDARDLDTDSLTTLRSGLKKKKGFPVEIQMDTKVKLKMDWLKSKKVGIRVTCVGIKGTVPSGKTPSVASVTDSECKVDLRIKIWKFSF	594

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere04g0407	594	MobiDBLite	consensus disorder prediction	334	369	-	-
	Dere04g0407	594	Pfam	Late embryogenesis abundant protein	459	558	IPR004864	-
	Dere04g0407	594	MobiDBLite	consensus disorder prediction	334	349	-	-
	Dere04g0407	594	Pfam	Ceramidase	56	195	IPR008901	GO:0006672\|GO:0016020\|GO:0016811
	Dere04g0407	594	PANTHER	OS01G0962200 PROTEIN	2	270	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere04g0407	Dere-ChrDere04	4193260	4200461	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere04g0407	369	587	EF-hand Containing Proteins	AT5G21130	27.193	2.09e-17	81.3