Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0353 ATGATCGGCATTGCTCATGGTTATGCCATATACAGCCATACAATTTACCCTGCATTACAACTGCTAAAACATGGGCAGAATGTTGATACTATATTGGTGAAGTGTGCTCAAGTTCTCATTGAGGCTGGAGCGAAAGTGGATGCTTTGGATAAAAATAAGAACACAGCACTTCATTATGCAACCGGTTATGGTAGGAAGGAATGTGTGGCTCTTCTCCTTCAAAATGGTGCTACAGTTACTCTCCAGAATATGGACGGGATAACTCTCATAGATGTTGCAAAGCTCAACAATCAGCATGAAGTACTCAGGCTACTTGAGAAAGATGCCTTCCTGTAG 336 0.4196 MIGIAHGYAIYSHTIYPALQLLKHGQNVDTILVKCAQVLIEAGAKVDALDKNKNTALHYATGYGRKECVALLLQNGATVTLQNMDGITLIDVAKLNNQHEVLRLLEKDAFL 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0353 111 SMART ANK_2a 52 81 IPR002110 GO:0005515
Dere04g0353 111 Gene3D - 8 109 IPR036770 -
Dere04g0353 111 SUPERFAMILY Ankyrin repeat 8 105 IPR036770 -
Dere04g0353 111 ProSiteProfiles Ankyrin repeat profile. 52 84 IPR002110 GO:0005515
Dere04g0353 111 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 22 107 - -
Dere04g0353 111 FunFam Ankyrin repeat domain-containing protein 2 57 108 - -
Dere04g0353 111 ProSiteProfiles Ankyrin repeat region circular profile. 52 83 - -
Dere04g0353 111 Pfam Ankyrin repeats (3 copies) 35 105 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0353 Dere-ChrDere04 3632690 3635169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0353 39 107 MAP Kinase Kinase Kinase AT3G58760 39.130 2.39e-08 48.5