Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0351 ATGGTGGCTGGGAAAGCCACGAACTTGTCAGACTTTGAGGACGAGGATGACCTCGACGAAGAACCCGGAGAAGTGATCGAATCGGCACCTCCCCAAAAGGTTGGCGAAGAGAGGGAGTTCAGTAGCTCCCGCCTCAAAAAGAAGCTCCTCAAGCCCGGGCATGGATGGGAGACCCCCGAGTTCAATGACGAAGTAACTGTTCACTACGTGGGGACTCTGCTTGATGGAACAAAGTTAGATTCCACTAGAGATAAGGGTGAACCTGTTACATTTACACTCGGTCAAGCTCAAGTACTTGCTGGGTTAGATCACGGGATTATCACCATGAAAAGGGGGGAAGTCGCATTATTCACATTACCTGCTGAGTCGAGCTATGAAGTTGGAAATTCCGGAGGTACTCCACTCAACTCAGTCCTACAGTTTGAGGTTGAACTCATTTCGTGGATCACAGTGGTGGATATTTGCAAAGATGGTGGAATTATCAAGAAAATTATGGAGAAAGGGAGCAGGAATGAGCGACCCAGTGATCTAGATGAAGTTCTTGTGAAGTACAAGGTGGCACTAGTTGATGGCACTGTTGTTTCAGAAACACCAGAAGAGGGAGTTGAGTTCCATGTGAAAGATGGTCATCTTATCCCAGGATTGCCGAAAGTAATTATGACTATGGAAAGGGGAGAGAAGGCTAAGTTAATTGTTCAACCTCAGTATGCAGTTGGGGATAAGGGGAGAGAAGCAGGAAGCAGGGTCCTTTCAATCCTGCCAAATTCAGTGTTACATGTTAATATTGAATTGGTGTCCTACAAGCCTGTTATTAATGTTACTGGTGACTCCAAGGTACTTAAGAAGATTCTAAAAGAAGGGAATGGTTCCCTCACAGCCAACGAGGGTGCTGCCGTTACTATTAATTATGTGGCTATGGTAGAAGATGGCTCGATATTTGAGAAAAAGGGAATTGATGGGACAAAGCCCTTGGAATTCATAACTGATGAAGAACAAGTAATTGTTGGTCTAGATCGAGCTGTGGCAACAATGAGGAAGGGTGAAAAGGCCATAATAAGTATACATCCTGATTATGCTTTTGGAAATGTTGAAGCAAGATGTGATTTAGCTACTGTTCAACCAGGGTCCAATGTAGTCTATGAAGTTGAGATGGTGGATTTTGTTCAGGAGAAAGCACCATGGGAATTGAATTATAATGAGAAAATTGAGGCAGCTGGGAAGAAGAAAGAAGAAGGAAACCTGTTATTTAAAATGGGCAAGTATCAGAGAGCAGGGAAGAAGTATGACAAGGCTGCTGATTATGTTAGTGAAGATGGATCCTTTGGGGATGATAAACAAAAGCTGGCTAAGGCGCTAAGAGTGTCATGCTGGCTGAATGGTGCAGCATGTAGCCTCAAACTTAATGATTTTTCAGGAGCAATCAAGTTATGCTCTCAGGTGCTTGATGTTGAGTTCTATAATGTGAAAGCTTTGTACAGACGAGCGCAGGCATATATAGAAACTGGAGACTTTCTTTTGGCAGATGTAGATGTAAAAAAAGCGCTTGAGGCAGACCCACAGAACAGGGAAGTAAAGCTGGTTCAGAGGAAATTGAAGCAACTTCAAGCTGAGGGTGACAAAAGAGATGCTATGCTCTATGCTAATATGTTTGCATATAAAGAGAAAGACTTGTCTGTTGCAACAAAGAGAATGAAGTTTGAGAAAGCCGAGGATGAAAGGAAAGATGAAGAAGGCATGAGAATGGAAGTGGACAAGGTCGCTGATAGTGCATTTCCTCCTGATGGTGGTTTAACTGTCGATTTGATCAATCCATAA 1815 0.4336 MVAGKATNLSDFEDEDDLDEEPGEVIESAPPQKVGEEREFSSSRLKKKLLKPGHGWETPEFNDEVTVHYVGTLLDGTKLDSTRDKGEPVTFTLGQAQVLAGLDHGIITMKRGEVALFTLPAESSYEVGNSGGTPLNSVLQFEVELISWITVVDICKDGGIIKKIMEKGSRNERPSDLDEVLVKYKVALVDGTVVSETPEEGVEFHVKDGHLIPGLPKVIMTMERGEKAKLIVQPQYAVGDKGREAGSRVLSILPNSVLHVNIELVSYKPVINVTGDSKVLKKILKEGNGSLTANEGAAVTINYVAMVEDGSIFEKKGIDGTKPLEFITDEEQVIVGLDRAVATMRKGEKAIISIHPDYAFGNVEARCDLATVQPGSNVVYEVEMVDFVQEKAPWELNYNEKIEAAGKKKEEGNLLFKMGKYQRAGKKYDKAADYVSEDGSFGDDKQKLAKALRVSCWLNGAACSLKLNDFSGAIKLCSQVLDVEFYNVKALYRRAQAYIETGDFLLADVDVKKALEADPQNREVKLVQRKLKQLQAEGDKRDAMLYANMFAYKEKDLSVATKRMKFEKAEDERKDEEGMRMEVDKVADSAFPPDGGLTVDLINP 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0351 604 MobiDBLite consensus disorder prediction 568 604 - -
Dere04g0351 604 Gene3D - 35 151 IPR046357 GO:0003755
Dere04g0351 604 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 177 268 IPR001179 GO:0003755
Dere04g0351 604 MobiDBLite consensus disorder prediction 568 584 - -
Dere04g0351 604 Gene3D Tetratricopeptide repeat domain 394 548 IPR011990 GO:0005515
Dere04g0351 604 FunFam Peptidylprolyl isomerase 269 390 - -
Dere04g0351 604 SUPERFAMILY FKBP-like 153 268 - -
Dere04g0351 604 ProSiteProfiles TPR repeat profile. 488 521 IPR019734 GO:0005515
Dere04g0351 604 MobiDBLite consensus disorder prediction 1 44 - -
Dere04g0351 604 FunFam Peptidylprolyl isomerase 393 548 - -
Dere04g0351 604 SUPERFAMILY FKBP-like 274 405 - -
Dere04g0351 604 SMART tpr_5 454 487 IPR019734 GO:0005515
Dere04g0351 604 SMART tpr_5 405 438 IPR019734 GO:0005515
Dere04g0351 604 SMART tpr_5 488 521 IPR019734 GO:0005515
Dere04g0351 604 Gene3D - 152 267 IPR046357 GO:0003755
Dere04g0351 604 Coils Coil 517 537 - -
Dere04g0351 604 SUPERFAMILY FKBP-like 40 150 - -
Dere04g0351 604 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 296 388 IPR001179 GO:0003755
Dere04g0351 604 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 292 384 IPR001179 GO:0003755
Dere04g0351 604 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 173 265 IPR001179 GO:0003755
Dere04g0351 604 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 57 146 IPR001179 GO:0003755
Dere04g0351 604 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 62 149 IPR001179 GO:0003755
Dere04g0351 604 PANTHER PEPTIDYLPROLYL ISOMERASE 151 268 - -
Dere04g0351 604 SUPERFAMILY TPR-like 399 545 IPR011990 GO:0005515
Dere04g0351 604 Gene3D - 268 393 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0351 Dere-ChrDere04 3613799 3619310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0351 33 551 Calmodulin-binding Proteins AT3G25230 55.662 0.0 566