Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0349 ATGGGAAGGCTTCGTTGTAATTGCAATAATGAGATTCTTCTTCTCCTTGCAGTGATCCTCTTACATATTTCCTCTCAATTAGCAACATGTCGCTCAATAGTAAGATTCCTTCCTGGCTTCCAGGGACCACTTCCTTTTGTTTTTGATAAATGCTTCCACTTGCATTTGGAAAAGAGGAATACAATGGGAGCCTGCCTAATTTGGTCTTGCGCCACAACTCATGAACAAAGGTTTGTTCTTACTTCTATACTCTCTTTCTGTTTTTTTTTGGTTGATGTTGGTGCTGTTTTGCAAGAAGCCTGGGGTGAGCTGGGAAATGTTAAAGCAGACAAAGCGTTTCAAATGGGAAGGCTTAGCTGTAATTGCAGGAATGAGACTCTTCTTCTCCTTGCATTACTCCTGTTAAATATTTTCTTTCAATTAGCAACATGTCGCTCAATAGTACGGTTCCTTCCTGGCTTCCAGGGACCACTGCCTTTTGTTTTAGAAACAGGGTATGTAGGAGTGGGTGAAACAGAGAATGTGCAACTGTTTTACTACTTCATTGAGTCACAGAACAATCCCAAAGATGACCCACTCTTCCTTTGGCTAACCGGTGGGCCTGGTTGCTCTGCACTTTCAGGGTTAGCCTTTGAAATTGGTCCACTTACATTTAAAATAGAGGAATACAATGATGGCTTGCCCAATTTGGTCTTGCGCCACAACTCATGGACAAAGGTAAGTAGCATTATATTCTTAGATTTGCCTGCTGGCACCGGCTTCTCTTATGCCAAAACAGACGTTGTGGCTGAGCGAAGTGACTGGAAAACAGTTCATCATGCCCATCAATTTATTCGGAAGTGGTTGATTGGTCATCCAGAGTTTTCCTCCAATAAAGTGTACATTGGTGGCGACTCATACTCGGGCATTCCTATCCCAGTAATTGTTCATGAAATATCAAAAGGAAATGAAGCTGGAGTCAAACCCTTGATAAATCTTCAGGGATACTTGTTGGGTAATCCATTGACAAGAGCACCTAAAGTAAATTATAAAGTCCCATTTGCTCATGGAAAGGCATTAATTTCCGACGAACTATATGAGTCGCTGCGAAAGAATTGCGGAGAAGATTATCAAAGCAAAGACCCCAAAAATCTTCTTTGTTCAAGAGATACCCAGTCCTTCCAAAAGACTGTTTCAGGAATTAATATTGCACAAATTTTAGAATCTATATGTGAGTTCGGCATGGAAAAGCCATTGGAAAATTTTTGGAGAAGGTCTCGCACTTATAAGCCCACGATGTTTCTTGAGTCTCATCTCACATTACCTCCCATGAACTGCCGGATTTATGGTTATTTCCTCTGTCGTTATTGGGCCAACGATGACAATGTTCAGAAGGCACTTCATATTCGGAAGGGAAGTATAGGAAAATGGCAGCGTTGTAGCTATTCTACACATTACAAGCATGAAATCCCTGGAACCGTCCCATATCATATGAATGTCAGCAGAAAAGGCTATCGTTCATTGATTTACAGTGGGGATCATGACATGTTAATTCCTTTCTTGGACACTCAAGCGTGGTTAAGATCTATGAATTTCTCCATTGTCGATGACTGGAGGCAGTGGTATTCAAATGGCCAAGTTGCAGGATACACGAGGACTTACTCCAATCAAATTACATATGCAACCGTGAAGGGTGGAGGACATACAGCTCCTGAATATAAACCTGAAGAATGTCTTGACATGTTCAGTCGGTGGATATCTCATAAACCTTTGTAG 1755 0.4142 MGRLRCNCNNEILLLLAVILLHISSQLATCRSIVRFLPGFQGPLPFVFDKCFHLHLEKRNTMGACLIWSCATTHEQRFVLTSILSFCFFLVDVGAVLQEAWGELGNVKADKAFQMGRLSCNCRNETLLLLALLLLNIFFQLATCRSIVRFLPGFQGPLPFVLETGYVGVGETENVQLFYYFIESQNNPKDDPLFLWLTGGPGCSALSGLAFEIGPLTFKIEEYNDGLPNLVLRHNSWTKVSSIIFLDLPAGTGFSYAKTDVVAERSDWKTVHHAHQFIRKWLIGHPEFSSNKVYIGGDSYSGIPIPVIVHEISKGNEAGVKPLINLQGYLLGNPLTRAPKVNYKVPFAHGKALISDELYESLRKNCGEDYQSKDPKNLLCSRDTQSFQKTVSGINIAQILESICEFGMEKPLENFWRRSRTYKPTMFLESHLTLPPMNCRIYGYFLCRYWANDDNVQKALHIRKGSIGKWQRCSYSTHYKHEIPGTVPYHMNVSRKGYRSLIYSGDHDMLIPFLDTQAWLRSMNFSIVDDWRQWYSNGQVAGYTRTYSNQITYATVKGGGHTAPEYKPEECLDMFSRWISHKPL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0349 584 ProSitePatterns Serine carboxypeptidases, histidine active site. 551 568 IPR033124 GO:0004185
Dere04g0349 584 Gene3D - 443 584 - -
Dere04g0349 584 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 146 568 IPR001563 GO:0004185|GO:0006508
Dere04g0349 584 SUPERFAMILY alpha/beta-Hydrolases 148 583 IPR029058 -
Dere04g0349 584 FunFam Carboxypeptidase 486 581 - -
Dere04g0349 584 Pfam Serine carboxypeptidase 152 580 IPR001563 GO:0004185|GO:0006508
Dere04g0349 584 FunFam Serine carboxypeptidase-like 11 142 584 - -
Dere04g0349 584 Gene3D alpha/beta hydrolase 143 411 IPR029058 -
Dere04g0349 584 PRINTS Carboxypeptidase C serine protease (S10) family signature 246 256 IPR001563 GO:0004185|GO:0006508
Dere04g0349 584 PRINTS Carboxypeptidase C serine protease (S10) family signature 551 564 IPR001563 GO:0004185|GO:0006508
Dere04g0349 584 PRINTS Carboxypeptidase C serine protease (S10) family signature 233 245 IPR001563 GO:0004185|GO:0006508
Dere04g0349 584 PRINTS Carboxypeptidase C serine protease (S10) family signature 281 306 IPR001563 GO:0004185|GO:0006508
Dere04g0349 584 FunFam Carboxypeptidase 438 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0349 Dere-ChrDere04 3575480 3584677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0349 443 584 Calmodulin-binding Proteins AT2G22960 63.636 4.60e-64 206