Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0343 ATGGGTCCTAATCTTGGGCCTTCGGCCTCAGCCCAACAAGCTATGAGGAGTCGGCGCCAGGGTCTCTGCGTTCGGACCAATTCCTGGGGATTGAAGGCACCGGCTTTGCATATTTCCAAAGTCCGCCAGTTGTCGTTTTGTTTGTTTCCCCAAGACCCTACGCTTCTCAATCTTGAGTCAGCATGCTCCGATTTGAAAACCCTCCTTCGAGCTTCCAAGAAAATGGAAGATAACCTTGGAAACATGGAGACAAGGTTTGATGTTATTGAAGGAACTCTGTCCACATCATCCAGAAGTGTGGCCCCTTTACAGTCTTTGGCCATGTCCACCAAAGCCCTCGATACTAGAATCAACAGAGCTGTTTCTCCTGCCCTTGGACTCCTCGACAGCTTCAAGCTCTATGAGTCTCTCCAACAGAAGCTTCTCGATCTCTCATCCAAACTATCGGAGGAGAAGACTCAGCAAAAACGTCTCCAGAATCTGCTTGATTACATGGATTGTGTTGATAAGCTAAATGAGGCTATTAATTCCATTAGTCAAGAGGGTGAGCCAGTGATTCAGAGGCTTCAAGAGGTGGTGGAGTTTATAAGCCGAACAAAGGCGGCAGATCAGTACAGGACGCAGAGGTTAAGAGAGACACTAATCACTCTCAAGACACTCTATGAGACAGAGGTCGATGCCATGAGGTTTGAAGGTTTACTGGACGAGGCGTTGCTTCATATGCAAGATGAGTACGATAGCATATTACTACAAATAAGGCATCACAACGTCGGGGATCTATTACAGCAGCAGGCAAAATATGAAACTGATGATGTTGCCGTTGACTCTGACTTAGGCTCAGAGCTGGAAATTGAGGTGCTCAAGCGAATTTCAGAGACTCTAGCTGCCAATGATTGCTTGGATATATGTATTGACATATATGTCAAGGTAAGGTATAGAAGGGCTGCCAAAGCATTAATGAGGTTAAACCCGGATTACTTAAGAACATATACCCCAGAAGGAATCGACGAAATGGAGTGGGAAAGCTTAGAAATAGCGATAATTCTTTGGATCCAACACTTTGAAGTTGCTGTTAAGAAAGTTCTCTTCTCGGAAAAGAAGCTCTGCGACAGAGTCATGGGTAAAATCATGGATGGACTAGTGTGGCCGGAATGCTTCGCCAAAATAGCTGACAAAATAATGGCGGTGTTCTTTCGATTCGGAGAAGGTGTAGCCAGAAGCAGCAAAGAGCCGCAGAAGTTGTTCAAGCTGTTGGATATGTTTGAGTCGTTAGAAAAACTCAAACCCGAATTCTTGGAAATTTTCGACGGTGAAGCCGGAGCGGATTTCTGCACGCGGTTCCGAGAGGTGGAGAAGCTTCTAATCGACGCGTCAAGCAAAGTATTTTGGGAATTTGGGCTGCAAATAGAAGGGAATGCGGATGGTTTTCCACCTCCACAAGATGGCTCTGTTCCGAAACTCGTAAGGTACGTCATTAATTACCTGAAATACCTTGCAACCAAGAATTACAGAGCAGCCATGGGTAAGGTTCTCGAAACAGAGCAAATATGGAAAGCTGGGATATTATCGAAACCCGATACAGACGAAAATTTACTAAAGGATGCCATTTTCAACATCATGGATGCCCTTCAGAGAAACATAGAGTCTAAACGCTCCCGTTGCAGGGACAAAACTTTGATCCATATATTCGCAATGAATACGTACTGGTACATTTATATGAGGGCGAAGAACTCAGAGCTTGGTGAGTTATTGGGTGAACAATACATGAAAAGCAAATACAAGGCAGTGGCAGAGGAATCGGCCTACATGTATCAGATGCAAGCATGGGGAGTTTTAGTGAGGATTTTGGATATGGAGGAGGAGGAATTGAAGAATCAGGGGAACGACACCATTGGAGGTTTAGTGACTGAAAAAATTGAAACTTTTTTGAAGTGTGTGAATGACACTTCTCAGAAGCACAAAGGGTATTATAGCATACCAGATGAAGATTTGAGGGAACAGATAAGAGAAGCCACCGTGAAGCTTGTGGTAGAAGCATACACCGAGTTCTTGGAGTCCTACTCAGGACTATTGCATAGGCCATTGTATCCGAGTCCTCAAAAGTTGCAGGGTTTGGTGGGTCAGGCATTTGATGGTGGTGATATGAAGTTGAAGCGACGGAGTTTGAACGATCGAATGGCCGGCCGTACCTCTGCGTCTCTGGAGGGAGAGATAAAAGATTTTCGACGGTCCAGATCCAAGACTAGTGATGTTTGA 2256 0.4504 MGPNLGPSASAQQAMRSRRQGLCVRTNSWGLKAPALHISKVRQLSFCLFPQDPTLLNLESACSDLKTLLRASKKMEDNLGNMETRFDVIEGTLSTSSRSVAPLQSLAMSTKALDTRINRAVSPALGLLDSFKLYESLQQKLLDLSSKLSEEKTQQKRLQNLLDYMDCVDKLNEAINSISQEGEPVIQRLQEVVEFISRTKAADQYRTQRLRETLITLKTLYETEVDAMRFEGLLDEALLHMQDEYDSILLQIRHHNVGDLLQQQAKYETDDVAVDSDLGSELEIEVLKRISETLAANDCLDICIDIYVKVRYRRAAKALMRLNPDYLRTYTPEGIDEMEWESLEIAIILWIQHFEVAVKKVLFSEKKLCDRVMGKIMDGLVWPECFAKIADKIMAVFFRFGEGVARSSKEPQKLFKLLDMFESLEKLKPEFLEIFDGEAGADFCTRFREVEKLLIDASSKVFWEFGLQIEGNADGFPPPQDGSVPKLVRYVINYLKYLATKNYRAAMGKVLETEQIWKAGILSKPDTDENLLKDAIFNIMDALQRNIESKRSRCRDKTLIHIFAMNTYWYIYMRAKNSELGELLGEQYMKSKYKAVAEESAYMYQMQAWGVLVRILDMEEEELKNQGNDTIGGLVTEKIETFLKCVNDTSQKHKGYYSIPDEDLREQIREATVKLVVEAYTEFLESYSGLLHRPLYPSPQKLQGLVGQAFDGGDMKLKRRSLNDRMAGRTSASLEGEIKDFRRSRSKTSDV 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0343 751 Coils Coil 65 85 - -
Dere04g0343 751 PANTHER EXOCYST COMPLEX PROTEIN EXO70 161 703 IPR004140 GO:0000145|GO:0006887
Dere04g0343 751 Coils Coil 134 154 - -
Dere04g0343 751 Gene3D Exocyst complex component Exo70 199 720 - -
Dere04g0343 751 Pfam Exo70 exocyst complex subunit 350 690 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dere04g0343 751 SUPERFAMILY Cullin repeat-like 146 701 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0343 Dere-ChrDere04 3372968 3375484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0343 52 693 EXO70 exocyst subunit family AT4G31540 29.771 2.81e-79 266