Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0322 ATGCCCAGAGTTTGGAAGATGGAAGATATTCCCTACACCCAGACCCACCAGCGCACAAAAAGCCACAGTCACACTCACAAACTCAACCACAGTTACTTTGCTAACTCTCCCTGTCAGAAGCGCATCTTCATTTTCCAAAGCCTCCCTTCTTCCTTCTTCCTTGTGTGGGTGCGTGCCCTTGATTTTGGTCTCCCGATGAGCTGCAACGGTTGTCGAGTCCTCCGAAAGGGATGCAGCCAAGAGTGCGCTCTGAGGACGTGCCTCCAGTGGATCGATTCCCCTCAAGCTCAAGCCCATGCCACTCTCTTCGTTGCCAAATTCTTCGGCCGTAGCGACCTCATGTCCTTCATTTCCTCCGTTCCAAAATCCACCAGACCAGCCTTGTTTCAGTCTCTGCTGTACGAAGCGTGCGGGCGAACCGTGAATCCCGTAAACGGTGCCGTAGGACTCCTGTGGAGTGGTAACTGGCACGTGTGCCAGGCAGCTGTGGAGACGATACTAGCCGGAGGTGTTCTTCGGCCGTTACCGGAGACTTTCGACGGATTTCTTCGGCCGATCTTGGATGAGTCTTCTTCTGACATTGGTAGAACTGTGCGCTCTCAATTCCGGCCATTCATGCATGACTTCAGAGAGTTGGATCAAAAGTCGGCCTTCGATCTCTCGCTGCTTCCGGAGTCTTACCACGATGTATTCCCTGGGAGGGGTGGCACGGCGTTAAGGAGGCAGAACAATCCGCCCACGTCGTTGTTTTCTGCTGAATTGGAGAGGAAGAGCTATGGGAGTTGCGGGCACGAAAAGAATAATAAGCTTTTGAATCTGTTCGTAAGAAAGGGTAGCAAAAGAAAGATGGGCAGGAATGGGCTGCGATTGAGAAGAATGGAGGAATCCCTTAAGAAAGGGAGAATTGAGGAGAGAATTGGAGAATGCAGAGTGCAAAGCCATGGCAGAGGAAGGTGGGAGGCACGTCAGCCTGGGGCGTAG 981 0.525 MPRVWKMEDIPYTQTHQRTKSHSHTHKLNHSYFANSPCQKRIFIFQSLPSSFFLVWVRALDFGLPMSCNGCRVLRKGCSQECALRTCLQWIDSPQAQAHATLFVAKFFGRSDLMSFISSVPKSTRPALFQSLLYEACGRTVNPVNGAVGLLWSGNWHVCQAAVETILAGGVLRPLPETFDGFLRPILDESSSDIGRTVRSQFRPFMHDFRELDQKSAFDLSLLPESYHDVFPGRGGTALRRQNNPPTSLFSAELERKSYGSCGHEKNNKLLNLFVRKGSKRKMGRNGLRLRRMEESLKKGRIEERIGECRVQSHGRGRWEARQPGA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0322 326 ProSiteProfiles LOB domain profile. 66 172 IPR004883 -
Dere04g0322 326 Pfam Lateral organ boundaries (LOB) domain 67 165 IPR004883 -
Dere04g0322 326 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 66 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0322 Dere-ChrDere04 3215076 3217369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0322 66 191 AS2 family AT3G49940 74.046 2.62e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere04g0322 LOB 1.2e-25 No_clan