Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0298 ATGGCGTTTGTGAGTTCTTCTACGCTGATAATCCTTTTCATTTCGGCATTTCTTTTCCAATGTTCATCTTCATCCTCTAGCAATATCTTTTCCCTAACAGTAGAGAATCCAGAAAACGTTATAAAATCAGAAAACGGCATGTTCAGTGCTGGGTTTTATGCCGTTGGGGAGAATGCCTTTTCCTTTGCCATCTGGTTCACCGAACCTCCTGGCGAAAACTTGACTGTCATTTGGATGGCAAATCGCGACGAACCCGTGAACGGAAGGGGCTCAACGCTTACCCTCCGTAACACAGGTGATCTTGTGTTAAATGATGCGGGTCACTTCGATGTCTGGTCCACCAACACCACCTCAACTACTGCTCCGCAATTGCTTCTCAAGGATGAGGGTAATCTTGTTCTACTTGACTCTCATGGGGCTCCTCTGTGGCAAAGTTTTGATTTTCCAATAGATACACTTGTCCCCGGACAACGTCTCACCAGATACACCAGCCTCGTCTCCTCCAGAAGTCAGAGTAACCGCTCCTCTGGTTTCTATAAACTGTTTTTCGACAACGATAATCTTCTTCGTCTTCTCTATGACGGCCTCGACGTTTCAAGTCTTTACTGGCCAGATCCCTGGCTTGTCAGCTGGGATGCCGGAAGGTCCACCTACAATGCAAGTCGGGTTGCGGTTCTCGATTTGTATGGTAATTTCAGTTCAAGCGACGACTTTACTTTCATGACATCAGATTATGGCCCCATTCTTCAGAGAAGATTAACCATTGATTACGATGGTAATGTCCGAGTCTACAGTCGAAGAAATTGGGGAGAGAAATGGTATGTTTCCTGGGAAGCCAAATCAGACCCTTGCACAATTCATGGCATCTGTGGAGCCAACAGTATGTGCACTTATGATCCTTATTCTGGTAGAAAATGCTCTTGTCTTCCAGGTTACAGGGTCAAGGATGCAAGCGACTGGTCTTTAGGGTGCGAGCCAAAATTCAATTTGTCTTGCAACTCAACGGAGTCTCGCTTTTTGCCTATAGACAGTGCCGACTTCTACGGCTACGACCATAATAAGCAGTGTGCGAATTACACATTTGATCAATGTAAGAATATATGCTTGAAATTATGTGATTGTAAAGGCTTCCACTACGCATTTTACCCGGACGGCGGCGTTTATAAATGTTACCCGAAGACAATGTTGCTCAATGGGTATCTTTCCCCTGGTCACCATGGAACGGTTTACCTAAGACTGCCTAAATCCAGTTCTTTCGCTTTTGAAGAATCCGTAATGAAGTGTCCCCACGCTAATACCGTAAAGCTTGAGAGAGTGTATGCCTTGTCACATGACAAAGGTCTAGTGAAGGTGTTTCTGTGGTTAGTGTTGGCAATTGGAGCATTTGAAATTGTGTGCATCTTTCTGGTTTGGTGTCTGTTGATCAGGACGAGGAAAAAGTCCGGTGCAGATCAGCACAGTTATCATCTTACTGCAACTGGATTTAGGAATTATAGCTACTCTGAGTTGAAGCAGGCAACAAGAGGGTTCAGTGAAGAGATTGGAAGGGGTGCTGGAGGAATCGTATACAAGGGTGTATTGTCGGATCGACGAGTTGCAGCAATCAAGAGACTCAACGATGCCAACCAAGGAGAGAGTGAGTTTCTAGCTGAAGTCAACATAATTGGAAGGCTTAATCACATGAACCTAATTGACATGTGGGGGTATTGTGCGGAGGGAAAGCACAGGTTGTTGGTGTATGAGTATATGGAGAATGGTTCTTTGGCAGAAAATCTCGTGTCTAGCAACAACTCACTTGACTGGAGAAAGCGGTACGACATCGCTCTGGGAACGGCCAGAGGTCTTGCATATCTTCATGAGGAATGCTTGGAGTGGATTCTGCATTGCGATATAAAGCCTCAAAACATACTTCTAGATTCGGATTTTAAACCCAAGGTGGCAGATTTCGGATTGTCTAAGCTACTGAACAGAAATAATCTCAACAACTCAAGTTTCTCAAGGATTAGAGGAACTAGAGGTTATATGGCACCCGAGTGGGTTTTCAATTTACCAATCACTTCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTGTTGGAGATGATAACGGGAAAAAGCCTAAGGGCCATCCAGACAGTTGATGGAGCAGACTCACATCACGGAAGGCTGGTAACATGGGTGAGGGAGAAGAACAGAGGAAATGAAATGACATCATCATGGGTGGAACAAATTATCGATCCTACGATTGAGGGAAATTATGACATAAAGAAGATGGAGATTCTGGCTAGACTGGCTTTGGACTGTGTTGAGGAAGAGAAAGATGCAAGACCTACAATGAGTCAGATAGTGGAGATGCTTCAGAGTCATGATGTTGACTCTCAGTGA 2385 0.4457 MAFVSSSTLIILFISAFLFQCSSSSSSNIFSLTVENPENVIKSENGMFSAGFYAVGENAFSFAIWFTEPPGENLTVIWMANRDEPVNGRGSTLTLRNTGDLVLNDAGHFDVWSTNTTSTTAPQLLLKDEGNLVLLDSHGAPLWQSFDFPIDTLVPGQRLTRYTSLVSSRSQSNRSSGFYKLFFDNDNLLRLLYDGLDVSSLYWPDPWLVSWDAGRSTYNASRVAVLDLYGNFSSSDDFTFMTSDYGPILQRRLTIDYDGNVRVYSRRNWGEKWYVSWEAKSDPCTIHGICGANSMCTYDPYSGRKCSCLPGYRVKDASDWSLGCEPKFNLSCNSTESRFLPIDSADFYGYDHNKQCANYTFDQCKNICLKLCDCKGFHYAFYPDGGVYKCYPKTMLLNGYLSPGHHGTVYLRLPKSSSFAFEESVMKCPHANTVKLERVYALSHDKGLVKVFLWLVLAIGAFEIVCIFLVWCLLIRTRKKSGADQHSYHLTATGFRNYSYSELKQATRGFSEEIGRGAGGIVYKGVLSDRRVAAIKRLNDANQGESEFLAEVNIIGRLNHMNLIDMWGYCAEGKHRLLVYEYMENGSLAENLVSSNNSLDWRKRYDIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDFKPKVADFGLSKLLNRNNLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKSLRAIQTVDGADSHHGRLVTWVREKNRGNEMTSSWVEQIIDPTIEGNYDIKKMEILARLALDCVEEEKDARPTMSQIVEMLQSHDVDSQ 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0298 794 SUPERFAMILY Protein kinase-like (PK-like) 485 787 IPR011009 -
Dere04g0298 794 FunFam S-receptor-like serine/threonine-protein kinase 477 582 - -
Dere04g0298 794 Gene3D - 150 277 IPR036426 -
Dere04g0298 794 CDD STKc_IRAK 514 787 - -
Dere04g0298 794 Gene3D Transferase(Phosphotransferase) domain 1 583 794 - -
Dere04g0298 794 CDD B_lectin 43 149 IPR001480 -
Dere04g0298 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Dere04g0298 794 SMART blect_4 31 149 IPR001480 -
Dere04g0298 794 Pfam D-mannose binding lectin 75 162 IPR001480 -
Dere04g0298 794 FunFam Serine/threonine-protein kinase 583 794 - -
Dere04g0298 794 PIRSF SRK 1 793 IPR024171 GO:0004674
Dere04g0298 794 ProSiteProfiles EGF-like domain profile. 280 318 IPR000742 -
Dere04g0298 794 ProSiteProfiles Protein kinase domain profile. 508 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0298 794 PANTHER OS07G0415500 PROTEIN 5 788 - -
Dere04g0298 794 Pfam S-locus glycoprotein domain 238 315 IPR000858 GO:0048544
Dere04g0298 794 CDD PAN_AP_plant 328 414 - -
Dere04g0298 794 Gene3D - 23 146 IPR036426 -
Dere04g0298 794 Pfam Protein kinase domain 511 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0298 794 SMART serkin_6 508 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0298 794 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Dere04g0298 794 Gene3D Phosphorylase Kinase; domain 1 474 582 - -
Dere04g0298 794 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Dere04g0298 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 165 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0298 Dere-ChrDere04 3002424 3004808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0298 479 786 Receptor kinase-like Gene Family AT3G58690 39.748 2.07e-66 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere04g0298 Pkinase 4.6e-53 CL0016