Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0287 ATGGAGAGTGGACTACCCTTGCTTAATTGCCTCTTGCAGCATAGTCTGAGAAGCCTATGTTCACCTTCGGATTCTTCCACTTCTTCTAAGTGGGTCTATGCTGTCTTTTGGAGGATACTGCCCCGAAACTACCCTCCACCGAGGTGGGAATTTGGAGGGACTGCTCTTGATCGCTCCAAGGGAAATAAAAGAAACTGGATCCTGGTTTGGGAAGATGGATTCTGTGATTTTAACGAATGCGAAAGAGCGAGGAGCGGATACTTCAACGGGAAGTTTGGAGCAGACGTATTCTTCAAAATGTCACATGAGGTCTACAGTTATGGGGAGGGATTACTGGGGAAAGTGGCCTCGGATAACAGCCACAAATGGGTGTACAGAGACACCCCAAATGAGTCTGAACCTAGCTACATTGCTTCTTGGAATGCTTCAGTTGAACCTCGACCAAGGGCGTGGGAATATCAGTTCAATTCTGGTATTCAGACCATTGTCGTCATTGCGGTCAGAGAAGGCATAGTTCAACTGGGTTCACTTAGCAAGATAGCAGAAGATCTCAATCTAGTGATCGGCATACAAAAGAAATTCTGCTACATTCAGAGCGTACCGGGCGTCTTCGCTATTCAAAGACCATATCTACCCATCCAACATCCATACATGCTCAAACCTAACATCCAGATGATGGATTGCAATGAAACGGCACTCTCTGTGTACAATATGAGCCAACTAAGCGGAGTGAAAAGACTAATCGACGAAACACCCAACTATGCTTCCAGGAAATCTATTAACTTGGGCTGGAATTCCCCACAGAATGAAACAGCAGGGCCACCTCTTTGGTCACCTCCTCCTCCCTTGCCCTTGCTACCTAAGATCCCCTCTGCAGTGCCATCCTATAATTCCATTACAAATCTGCATGAAAATAGGATTATAAGCGCGAGTCACAGAGTGAAGGTTGAAGATCGCAGTTTTCACAATGTTAATGATGGTGATCAGGAAGGTTCTTTCAACACTAACATGGAGTTGCAAGATGGAGTGGCAGCGAGATCGAGATTTGAGTCAAAGTGA 1059 0.458 MESGLPLLNCLLQHSLRSLCSPSDSSTSSKWVYAVFWRILPRNYPPPRWEFGGTALDRSKGNKRNWILVWEDGFCDFNECERARSGYFNGKFGADVFFKMSHEVYSYGEGLLGKVASDNSHKWVYRDTPNESEPSYIASWNASVEPRPRAWEYQFNSGIQTIVVIAVREGIVQLGSLSKIAEDLNLVIGIQKKFCYIQSVPGVFAIQRPYLPIQHPYMLKPNIQMMDCNETALSVYNMSQLSGVKRLIDETPNYASRKSINLGWNSPQNETAGPPLWSPPPPLPLLPKIPSAVPSYNSITNLHENRIISASHRVKVEDRSFHNVNDGDQEGSFNTNMELQDGVAARSRFESK 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0287 352 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 96 194 IPR025610 -
Dere04g0287 352 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 79 IPR025610 -
Dere04g0287 352 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0287 Dere-ChrDere04 2938726 2940492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0287 13 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.620 7.83e-17 80.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0287 04 2938726 2940492 Dere04g0287 04 2938726 2940492 ECH