Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0285 ATGGGAGCGAGAGTCGCACAGAATTGGTGGTTACTGGCTAAATTGGCTTTTCTTCGTTGCGTTTGCTGCATAGTGCGTACAGGAACGGTCACTGAGATGGGAACTCACATGCCACCGCCCTTACTCTCAAGCACTCCATCTTACACAAAACGACACTCTTCTTTCAAAGGCAACCATACGAGAAGCACCGTGCAGCGCATAGTCGATGACAATAACGGATTCATCAATAGTTTACTTGCTTCCAGTGCTGAGGCTCACAGAGATTGCCCCCTTCTAAAATTTCTCTCCTCCCTTTTCATTTTTACCTCCCAGGTTTCTTCCAGAATGCTTCAACGAGATCATTTCCTCCTTCAACTTCAAGTTCAAAACTTGCTGTTCTTTCTGTCATATTTATTTGTCTTCTTATTACTCTGCTCCTCTGTTGCTCCTTCTAGGCCTCCCTTCCATCATCCTCTACCTGCATTTAACTTATTCATGCCTTCTGATGCTCTTGCCTTACTGGCATTCAAATCCAAAGCTGATCTCAACAATCATCTCCATTTCTCTCCCAACGCCTCCGCTGACACTTTCTGCAAATGGCAAGGTGTCCAATGCAATGCAAAACAAAAGGTGGAGCGTCTTGTTCTTCAAGGTTTAGATCTCGGCGGTATTTTCGCTCTGGACACATTGTCTCGTCTGGACCAGCTCCGAGTCCTCAGTTTGCAGAACAACTCTCTCACCGGATCCATCCCTGACCTCTCCGGTCTACTCAATCTCAAAAGCCTTTTCCTCGATAACAACCGCTTCACCGGTTCTTTTCCTCTTTCAATCCTCTCCCTTCATAGGCTTCGTACATTGGATTTGTCCCGCAACAACCTCTCTGGGCCCATTCCCGCCGGCTTAACCAAGCTAGACCGTTTCTACTACCTCCGTCTCAGTTGGAATAGATTCAACGGAACCATCCCTCCCCTGAATCAGTCTGCTCTCCGAACCTTCGACGTCTCTGGTAACAACTTTACCGGTCCTATACCTGTCACACCCACTTTAGTCCGTTTTGGACCCTCCTCCTTCTCCTCAAACCCAGGCCTCTGCGGCGAAATCATCCACAAAGAATGCCATCCGAGCGCACCTTTCTTTGCACCAACGACTCCACACGCGGTAGCGCCGCCGCCGGCGGTGGCGCTTGGGCAAAGTGCACAAGTCCACGGCGTTGACGGCTTAATCCGTCCACCGTACAAGAAAAAGAACAGCAGAACCGCAGTGATTATTGGGTTCGCCGCAGGGATATGCATCCTTGTCGCTTCGCTTGTCTGTTTCGTGGTGGCCTTCAAGAAACAGAAAGACAAGAAAGAGCCTTCGACGAATGTAATGGGTTCGGATGCGGCGGCGACGGCAGAAGCAGCAGCGGTAATGCAACTGGAGCAAGAGAAGGAATTGGAGGAGAAGGTGAAGAGGGTGCAGGGAATGCAAGTGGGTAAGAGTGGGAGTTTAATGTTCTGTGCGGGGGAGGCTCAGCTTTATACGCTGGACCAGTTGATGAGAGCCTCTGCGGAGCTTCTGGGGAGAGGGTCGTTAGGGACCACGTACAAAGCGGTGTTGGATAATCGTTTGATAGTCACAGTCAAGCGCCTTGATGCTGCTAAAATGGCTGCGGACACAGCCAAGGAAAAGTTCGAGGGTCATATGGAATCAGTCGGTGGCCTTCGCCATCCCAATTTGGTGCCCCTTAGGGCCTATTTTCAGGCTAAGGAAGAGAGGCTTCTTATCTATGATTACGAGCCTAATGGCAGTCTTTTCTCCCTCATACACGGTTCGAAATCAAGCAGGGCAAGGCCATTGCACTGGACTTCGTGCTTGAAGATAGCAGAGGACGTAGCACAAGGGCTTTCCTACATCCACCAAGCATGGAGACTGGTGCATGGCAATCTCAAGTCCTCCAATGTTCTGCTCGGACCTGATTTTGAAGCATGCCTCACTGATTACTGCCTCTCCATGTTGGCCAACCCATCCAGCTTCCACGACGACCCTGATTCTTCAGCATACAGAGCTCCCGAGACCCGCAATCCAAATTACCAGCCAAACCCCAAATCTGACGTTTACACCTATGGCATTTTGTTGCTTGAACTTCTGACGGGGAAGCCTCCTTCAGAGCACCCATTCTTGGTGCCCACTGATATGGCAAGTTGGGTGAAATCCATTAGAGAAGATAATGGAGCCGAAGACAGTAGAATGGATATGCTTCTTGAGGTTGCTTCTACTTGTAGCTTGACCTCTCCTGAGCAGAGACCCACTATGTGGCAGGTCTTGAAGATGTTGCAGGAAATTAAAGAGATTGTATTATTAGAGGATGGTGAATTAGACCTTCGTACTACCACGTCTTAG 2361 0.4947 MGARVAQNWWLLAKLAFLRCVCCIVRTGTVTEMGTHMPPPLLSSTPSYTKRHSSFKGNHTRSTVQRIVDDNNGFINSLLASSAEAHRDCPLLKFLSSLFIFTSQVSSRMLQRDHFLLQLQVQNLLFFLSYLFVFLLLCSSVAPSRPPFHHPLPAFNLFMPSDALALLAFKSKADLNNHLHFSPNASADTFCKWQGVQCNAKQKVERLVLQGLDLGGIFALDTLSRLDQLRVLSLQNNSLTGSIPDLSGLLNLKSLFLDNNRFTGSFPLSILSLHRLRTLDLSRNNLSGPIPAGLTKLDRFYYLRLSWNRFNGTIPPLNQSALRTFDVSGNNFTGPIPVTPTLVRFGPSSFSSNPGLCGEIIHKECHPSAPFFAPTTPHAVAPPPAVALGQSAQVHGVDGLIRPPYKKKNSRTAVIIGFAAGICILVASLVCFVVAFKKQKDKKEPSTNVMGSDAAATAEAAAVMQLEQEKELEEKVKRVQGMQVGKSGSLMFCAGEAQLYTLDQLMRASAELLGRGSLGTTYKAVLDNRLIVTVKRLDAAKMAADTAKEKFEGHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYEPNGSLFSLIHGSKSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLTDYCLSMLANPSSFHDDPDSSAYRAPETRNPNYQPNPKSDVYTYGILLLELLTGKPPSEHPFLVPTDMASWVKSIREDNGAEDSRMDMLLEVASTCSLTSPEQRPTMWQVLKMLQEIKEIVLLEDGELDLRTTTS 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0285 786 Gene3D Phosphorylase Kinase; domain 1 476 585 - -
Dere04g0285 786 ProSiteProfiles Protein kinase domain profile. 507 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0285 786 FunFam Nuclear pore complex protein NUP107 159 316 - -
Dere04g0285 786 SUPERFAMILY L domain-like 159 357 - -
Dere04g0285 786 Gene3D Transferase(Phosphotransferase) domain 1 587 776 - -
Dere04g0285 786 Pfam Protein kinase domain 510 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0285 786 Pfam Leucine rich repeat 251 310 IPR001611 GO:0005515
Dere04g0285 786 MobiDBLite consensus disorder prediction 666 688 - -
Dere04g0285 786 Gene3D Ribonuclease Inhibitor 160 318 IPR032675 -
Dere04g0285 786 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 133 769 IPR046959 -
Dere04g0285 786 Gene3D Ribonuclease Inhibitor 319 369 IPR032675 -
Dere04g0285 786 ProSiteProfiles Leucine-rich repeat profile. 228 250 IPR001611 GO:0005515
Dere04g0285 786 SUPERFAMILY Protein kinase-like (PK-like) 511 769 IPR011009 -
Dere04g0285 786 Pfam Leucine rich repeat N-terminal domain 160 199 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0285 Dere-ChrDere04 2909707 2914754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0285 128 786 Receptor kinase-like Gene Family AT5G43020 59.292 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere04g0285 Pkinase 1.6e-31 CL0016