Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0274 ATGGCAAACTACGCGTTTCTGAACGATCAGCTGTCAAAGCATACCTCAATTTTTGGGTTACGACTGTGGGTGGTGCTGGGCATATGCGTAGGAGCAGCAATAGTCCTTTTACTGTTTCTGATATCCCTCTGGTTCACTTCCAGACGCTCCAACAATACTTCCTCTCTCAACTCTTCACACAATCCTACTATCTCAAATGTCTCCAAGGAGATCCAGGAAATCCGGATTGACCCTTCTTTTGACAAAACCCATGGAAGGTCCGACCCGCATCCGGAAGCAGAGGCTGTGGATAGTGCCCAAGCCGTGCTTGTTCAGCAGGAGGATGAAAGCCAAAGAATTCACATAGAGATTGGGAAGGATCACCGGATTTCATATCCAGAAAGGAGTGGTAGTTCATCGCATGGAAGCGGTGAGCATGGTTCAAGTTCTGTGCCAGAGGTTTCGCATTTGGGTTGGGGGCATTGGTACACTCTCCGAGAGCTTGAGGTCTCTACCAATGGATTTGCGGATGAGAACGTCATAGGAGAAGGTGCGTATGGAATTGTTTACCGTGGTGTGTTGGAAGATGATACCAAGGTTGCTGTTAAAAATTTGCTCAATAACAGAGGACAAGCCGAGAAAGAATTTAAGGTAGAAGTTGAAGCAATTGGACGTGTTCGGCACAAGAATTTGGTGAGATTACTTGGATATTGTGTTGAAGGAGCCCATAGGATGCTTGTTTACGAGTATGTTAACAATGGAAACCTAGAACAGTGGCTTCACGGAGATGTTGGGCCTTCAAGCCCTCTTACCTGGGAGATTCGCATGAATATAATACTTGGAACTGCAAAAGGGTTGACATACCTTCATGAGGGGCTTGAACCCAAGGTGGTTCACCGTGATATCAAGTCAAGCAACATATTGCTTGATAAGCAATGGAATCCAAAAGTTTCTGATTTTGGCCTCGCAAAACTCTTGGGATCAGAGAGAACTTATGTGACAACCCGTGTGATGGGAACATTTGGGTATGTGGCTCCAGAATATGCAAGTACCGGTATGTTAAATGAAAGAAGTGATGTGTATAGCTTTGGGGTTCTTCTTATGGAGATAATTTCTGGGAGAAACCCAGTAGATTACAGCCGCCCTCCTGGAGAGGTGAACCTGGTTGAGTGGTTGAAGACTATGGTTACTAACCGAAATGCAGAAGCAGTGCTCGATCCTAGGCTTCCTCAGAAGCCTTCTTCTAGGACACTGAAGCGTGCCTTGTTAGTAGCTTTGAGGTGCGTGGATCCCAATGCCCAGAAGAGGCCAAAGATGGGGCATGTTATACATATGCTTGAAGCTGATGAGTTCCCTTTTCGAGATGACCGTAGAACTGGGAGGGAAAATGGACGCTCCCAGCGGCAGAGCACAAGAGATGGGTTGACAGTAAATGAATCAGGTGACAGTAGTGGGTATGAAAGTAGTGTCCAAACTAACAAGTCTTTGTGGAGAAATCAAGAAACTGAAGACCAGTAG 1497 0.4603 MANYAFLNDQLSKHTSIFGLRLWVVLGICVGAAIVLLLFLISLWFTSRRSNNTSSLNSSHNPTISNVSKEIQEIRIDPSFDKTHGRSDPHPEAEAVDSAQAVLVQQEDESQRIHIEIGKDHRISYPERSGSSSHGSGEHGSSSVPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGAYGIVYRGVLEDDTKVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVNNGNLEQWLHGDVGPSSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERTYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLLMEIISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEAVLDPRLPQKPSSRTLKRALLVALRCVDPNAQKRPKMGHVIHMLEADEFPFRDDRRTGRENGRSQRQSTRDGLTVNESGDSSGYESSVQTNKSLWRNQETEDQ 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0274 498 SUPERFAMILY Protein kinase-like (PK-like) 143 440 IPR011009 -
Dere04g0274 498 MobiDBLite consensus disorder prediction 128 143 - -
Dere04g0274 498 MobiDBLite consensus disorder prediction 447 498 - -
Dere04g0274 498 MobiDBLite consensus disorder prediction 462 491 - -
Dere04g0274 498 MobiDBLite consensus disorder prediction 124 145 - -
Dere04g0274 498 MobiDBLite consensus disorder prediction 447 461 - -
Dere04g0274 498 CDD STKc_IRAK 174 440 - -
Dere04g0274 498 Gene3D Phosphorylase Kinase; domain 1 141 243 - -
Dere04g0274 498 ProSitePatterns Protein kinases ATP-binding region signature. 174 196 IPR017441 GO:0005524
Dere04g0274 498 FunFam Putative receptor-like serine/threonine-protein kinase 244 454 - -
Dere04g0274 498 SMART serkin_6 168 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0274 498 FunFam Probable serine/threonine-protein kinase At1g01540 148 243 - -
Dere04g0274 498 Pfam Protein tyrosine and serine/threonine kinase 172 439 IPR001245 GO:0004672|GO:0006468
Dere04g0274 498 ProSiteProfiles Protein kinase domain profile. 168 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0274 498 Gene3D Transferase(Phosphotransferase) domain 1 244 451 - -
Dere04g0274 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
Dere04g0274 498 PANTHER OS01G0323000 PROTEIN 2 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0274 Dere-ChrDere04 2782483 2784877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0274 130 442 Trihelix Transcription Factor Family AT1G70460 47.170 2.31e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dere04g0274 PK_Tyr_Ser-Thr 4.9e-48 CL0016