Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0218 ATGTCCGCTATCTCACGGTTTCACCCAGAAATGCGAAGCTTATCACCTTTCCCAGACCTCTCCTTGAACATCAGCCCTCCAGATTGTGAAGCCAAACAAGTGGAGAGCTACATTAAAGGATTCACAACAAAAACGCTTTACAACGATATGTGCTCCACCTCCGATTCTGGCAGCAGTGAGAGTAATTTAAGCCATGAAAATGCCTTTTCCCCCCTTGGCTATCGTGAGCCTACTTTGAGCTTAGGCATTAAAATGGAAGATTTGAATCCCCTTCAACTCCCAAGAAACGTGAATCATGTTCACAATCACCAGCCTCACATCCATGGTCGCGACTTTAAACTAAACGCCAGAGTCGTGAATGGTGTGAAGAGAAGCATCAGAGCTCCTAGAATGCGATGGACTACAACCCTCCATGCTCATTTTGTTCATGCTGTTCAACTTCTTGGCGGCCATGAAAGGGCAACTCCAAAGTCAGTGTTAGAGTTGATGAATGTTAAAGATTTAACCCTAGCTCACATGTATAGAACAGTGAAGAGCACTGCCAAATGTACAGGTCATGGCCACACAGAAATGGGCTTGACCCAAAAGCTAGCTGTTGTCGACGCGCATGGAGTCTCGGCTTGTCAGAGAGCCGATCTATCTCAGCCGCTTAAAAAATCTCACAGGCAATTCCATTCTCTATCCCTTCTCTCTCATTTTCAGTTTTCACAATTACATAAAAAGAAACTTCTTTCTATACTTGTGGATGGAAGGTCTTTGTCACATTCGGATATGACGCTTAACCTAGAATTCTCCCTTGGAAGACCCAGTTGGGACACTGACCACGCCCAATCCCAATCATCAACAGACTTAGCTCTTCTCAACTGTTAA 870 0.4471 MSAISRFHPEMRSLSPFPDLSLNISPPDCEAKQVESYIKGFTTKTLYNDMCSTSDSGSSESNLSHENAFSPLGYREPTLSLGIKMEDLNPLQLPRNVNHVHNHQPHIHGRDFKLNARVVNGVKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHMYRTVKSTAKCTGHGHTEMGLTQKLAVVDAHGVSACQRADLSQPLKKSHRQFHSLSLLSHFQFSQLHKKKLLSILVDGRSLSHSDMTLNLEFSLGRPSWDTDHAQSQSSTDLALLNC 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0218 289 Gene3D - 128 179 - -
Dere04g0218 289 SUPERFAMILY Homeodomain-like 126 172 IPR009057 -
Dere04g0218 289 NCBIfam myb-like DNA-binding domain, SHAQKYF class 129 172 IPR006447 GO:0003677
Dere04g0218 289 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 275 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0218 Dere-ChrDere04 2277903 2280473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0218 11 197 G2-like Transcription Factor Family AT5G42630 51.244 4.03e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere04g0218 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0218 04 2277903 2280473 Dere04g0218 04 2277903 2280473 ECH