Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0166 ATGGCCTCAAGCTCCAGTTGGACGGCAAAGCAGAACAAGAAATTTGAGAATGCTTTGGCCATGTACGACGAGGACACACCAGATCGGTGGCAAAAGCTGGCGAGAGCAGTGGGAGGGAAGACTGTGGAGGAAGTGAAGAGGCATTACGAGAAGCTTGTGGAAGATGTGAAGCTGATCGAGGAAGGTCATGTGCCCTTGCCCAATTACACTAATGCTGCTGCTGAACCACCTGCAAGACGACCCTCATCCTCCGTCAACCCTTACAATTACTTGGATGATCAAGAACGAAGGATGAAGACTCTGAGCCTCCAGTGA 315 0.5079 MASSSSWTAKQNKKFENALAMYDEDTPDRWQKLARAVGGKTVEEVKRHYEKLVEDVKLIEEGHVPLPNYTNAAAEPPARRPSSSVNPYNYLDDQERRMKTLSLQ 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0166 104 SMART sant 3 55 IPR001005 -
Dere04g0166 104 MobiDBLite consensus disorder prediction 67 104 - -
Dere04g0166 104 FunFam Transcription factor SRM1 1 66 - -
Dere04g0166 104 Pfam Myb-like DNA-binding domain 5 52 IPR001005 -
Dere04g0166 104 SUPERFAMILY Homeodomain-like 5 60 IPR009057 -
Dere04g0166 104 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Dere04g0166 104 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Dere04g0166 104 CDD SANT 6 53 IPR001005 -
Dere04g0166 104 Gene3D - 1 66 - -
Dere04g0166 104 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 74 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0166 Dere-ChrDere04 1687332 1687866 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere04g0166 Myb_DNA-binding 2.7e-06 CL0123