Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0164 ATGGCCAATATTACTCTGGTTAAAGCTTTGGACGTTTCCCCTCCTTCTGTAGTTAAGGTACACCGTTCAATATGCCTGGAGCTTGGGAAATTCATTGAACGAATTTTGCATATAGTATTAGCCATTGAATCCGCCCGACCAAATTGTGTGTTAGCAGTTCAGGCATTGTGCTCCTTGCATTTCACTTTGGATCAGACCAAGTTAGTTATCCAGCAATGTTCTGACTCCAGTAAACTCTACCTGGTACTCAAGGCACGCAGGATAGTTTCAAGATGTGAAAAACTAAGAAGTGATTTTGAGTTATATATGACCCAAATTCAAAAAGTGGTCCCTATATTGTTGGATGCTGAGATATCTGGAATCCTACATGACCTTAGAGCTGCAGAATTTTCCTTGGAATTTGCGGAAGATGAAGCTAGGAAGGCAATACTGGAACTGCTTGAGAAGGACTCGCCTGGTTCAGCATCTATAAACAATGCTGAACTTGATGCTGTTCTGATAGCAACTTCGAGGTTGAAAATAACATCTCCTTTAGCTCTCTTAGAGGAGAAAGCAGCTCTCAAATGGCAACTTGAAAGACTCGCAGACGCACACCAGAGGGAGAAGGAACTTGTGAAATACCTTTTATATCTTCTTATCAAATACAGGAAATTCATATGTCAGATTCAAACTGGAAGCCAGTCCATGAAACATGTATGCAATCATCAATCATTGAAGCATGAGCTGGCTGCGGATGATGCAATACGTGAGAATCAAAAAGATCAATCATTTAGCCCTCGAGTCGGAGATTCTTGA 795 0.4113 MANITLVKALDVSPPSVVKVHRSICLELGKFIERILHIVLAIESARPNCVLAVQALCSLHFTLDQTKLVIQQCSDSSKLYLVLKARRIVSRCEKLRSDFELYMTQIQKVVPILLDAEISGILHDLRAAEFSLEFAEDEARKAILELLEKDSPGSASINNAELDAVLIATSRLKITSPLALLEEKAALKWQLERLADAHQREKELVKYLLYLLIKYRKFICQIQTGSQSMKHVCNHQSLKHELAADDAIRENQKDQSFSPRVGDS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0164 264 Coils Coil 261 264 - -
Dere04g0164 264 Gene3D - 16 110 IPR036537 GO:0007166
Dere04g0164 264 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0164 Dere-ChrDere04 1654318 1655797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0164 15 188 U-box Gene Family AT4G36550 40.230 2.86e-37 137
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0164 04 1654318 1655797 Dere13g0648 13 8077826 8079695 CCT
Dere04g0164 04 1654318 1655797 Dere04g0164 04 1654318 1655797 ECH
Dere13g0648 13 8077826 8079695 Dere04g0164 04 1654318 1655797 ECH