Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0148 ATGCTCTCTTCCTTTCTTTTCAAGGACCAACCTCCCGCTGTCCAGACTTCTTCTTTATCCACCCCATCTTGCTTTTCTTGGACACCAAATATCACTCTGAATGGTGGTAACTTGAACACAAATTTTCAAGAAGCAAATCCCAGATCAAGAGCTTTCGCGCACAAGAAAGATATTGGATCCCTTCCTCTCAACGATTCCATGATACAAGGATTAGGTTATCAGTGGGTAAGTGCAGCAGAGAGCTGCATGAGCAGTAGTCAGTCAGATCATGACTTTGACCTTCAGTATTCAAAGAGAAAGGAAGAGTTCTCAGATGCTTTCCCCAGTAATAAGCTCACTGAAATGCTAACCACTAGTTCGAGTATGGAGCACAAAGATTTGAGTGCTCTTAGTGAGAAGCTATTGCTCAAGACCCTTTCTTCCGGAGACTTCTACTCCACTACTAGTTCTCAAAATTTTGATAATTTTGGTGGCATGGGTATGGGAGGAATACCTAGTAGAGGGAGCTTTAGCCAGATTTACCCCAGTATAAATATTTCAAACTTGAACCATTCATCCCCAGCTATGTCAAGCTCTTTGGATTTGAACATGCAGAGCCCAGATCTATTAACCTCTGCAAGATTTAATGGGAGTTTGAGCCAGCGTTCACAGGATGGTCTAGCAGCCAGATATACTGACAACCTTTCTTCTCCTCTTCATCCTATACACCACCAAATCGACAGGTCGTCATGCAACTCTAGCAATCCATCACACTTCAGTAATGGCATGGCAGAAACAAAGAGACCCAGCACTTTGGTGGAGTCAAAGGCTTCTCAATCTCAAACGGTACCAAAAAAATCACGATTGGAATCGCGCTCATCATGCCCTCCCTTTAAGGTTAGGAAAGAGAAACTAGGAGATAGGGTAGCGGCTCTTCAGCAGTTGGTAGCTCCTTTTGGCAAGACAGACACAGCATCCGTACTTATGGAGGCCATTGGATACATCAAATTCCTTCAGAACCAAGTCGAGACACTAAGCGTTCCATACATGAAGTCATCACGGAACCAGAGCAACAGAGCGATGCAAGGGGTTTCAGGTATAGAGGAGGCCAAGGAAGGGCCAAAGCTCGATCTCAGAAGCCAAGGCCTGTGTCTCGTGCCATTGTCATGTATGTCTTACTTAACAGGCGATGGCAGTACTGCAATGTGGCAACAACATGACTTTGGTGGAGCCACTTAA 1218 0.4483 MLSSFLFKDQPPAVQTSSLSTPSCFSWTPNITLNGGNLNTNFQEANPRSRAFAHKKDIGSLPLNDSMIQGLGYQWVSAAESCMSSSQSDHDFDLQYSKRKEEFSDAFPSNKLTEMLTTSSSMEHKDLSALSEKLLLKTLSSGDFYSTTSSQNFDNFGGMGMGGIPSRGSFSQIYPSINISNLNHSSPAMSSSLDLNMQSPDLLTSARFNGSLSQRSQDGLAARYTDNLSSPLHPIHHQIDRSSCNSSNPSHFSNGMAETKRPSTLVESKASQSQTVPKKSRLESRSSCPPFKVRKEKLGDRVAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRNQSNRAMQGVSGIEEAKEGPKLDLRSQGLCLVPLSCMSYLTGDGSTAMWQQHDFGGAT 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0148 405 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 126 385 - -
Dere04g0148 405 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 282 331 IPR011598 GO:0046983
Dere04g0148 405 Gene3D - 292 355 IPR036638 GO:0046983
Dere04g0148 405 MobiDBLite consensus disorder prediction 239 282 - -
Dere04g0148 405 MobiDBLite consensus disorder prediction 231 291 - -
Dere04g0148 405 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 292 344 IPR036638 GO:0046983
Dere04g0148 405 FunFam Transcription factor bHLH123 family 292 354 - -
Dere04g0148 405 CDD bHLH_AtbHLH_like 289 339 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0148 Dere-ChrDere04 1565418 1568606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0148 20 386 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 40.288 1.63e-67 219