Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0147 ATGTTGAAATCTAGGGACCTCCCAGATTGTTTCTATTCAAAACAGCCTATCATAGTCCGCCCAAGTGCTCCCACGCCAAACCATTCTCTCTATCTCTCTAACCTTGACGACCAAAAGTTCCTCAGATTCTCCGTTAAGTATTTTTACCTGTTCAAGAAATCTGTGAGCTCCGATGTGTTGAAGTGTTCTTTGTCCAGAGTTCTAGTCGATTACTACCCATTAGCTGGAAGATTGAGGGCCGGCGATGAGGACGATGGGAAGCTCCACGTGGATTGCAATGGAGAAGGTGCTCTTTTCGCTGAAGCTTTCATGCCAATCACTGCGGAAGAATTACTTGAATCTTCTAACATGCCAAACAAGTCCTGGAGGAAGCTCTTGTATAAGGTGGAAGCTCACAGTTTATTGGACATTCCTCCTCTCATAGTTCAGGTGACGAATCTCCGATGTGGGGGAATGGTTCTGTGCACCGCCATCAACCACTGTGTATGTGATGGCATAGGCACATCTCAGTTTTTACACGCATGGGGCCACCTCACCACCAAACCCAACTCTGATTTACCAATATTGCCCTTCCACGCTCGACACCTCCTAAAGCCTCGAAATCCCCCACAGGTAAAGTGCCATCACTCTGCATACACCAAAGCTATCTCCTCTCAGGTGGACCTGGTAAAGTTATTACAGTCGCAGCCCCTGGTTGCCACGTGTCTCACCTTCACCCCCTCTCATCTTCTTCACCTCAAGAAGCAGTGCGTACCTTCTCTAAAGTGCACAACCTTCGAAGCTCTGGCTTCGCACACGTGGTGCTCCTGGGTTAGATCCCTAAACCTATCCCCCACCCTCAAAGCGAAGCTGCTTTTCTCGGTCAACGTTCGGAAAAAGTTGACCCCAGAAATACCGCAAGGGTATTATGGGAATGGATTCGTGCTAGCATACGCGGAGAGCACAGTGGAGGAGCTAGCTACGGCTAACCTGCACCACGGTGTGAAACTGGTGCAACAAGGGAAGGCGAGGGTGGACGACGAGCATGTGAGGTCAATGATTGATTTGTTGGAGGACAAAACGGTAAAAACGGATCTCTCGGCGAGCCTGGTCATATCGCAATGGTCAAAGCTAGGGTTAGAGGAGGTGGATTTCGGAGAAGGGAAGCCGTTACATATGGGGCCTCTGACCAGTGATATTTACTGTTTATTTTTACCGGTGACGGGTGATTTTAATGCGGTGAGAGTGATGGTGTCAGTCCCTGAGGCTGTGGTTGAAAAATTTCTGTATTACATGAAAGAATACTTTTGGGATAATGGAGGAAATGGGCATGTTCAAAATGGCTATCTTCCTCAACAAAATAATGGCTTGGTCTGA 1356 0.4808 MLKSRDLPDCFYSKQPIIVRPSAPTPNHSLYLSNLDDQKFLRFSVKYFYLFKKSVSSDVLKCSLSRVLVDYYPLAGRLRAGDEDDGKLHVDCNGEGALFAEAFMPITAEELLESSNMPNKSWRKLLYKVEAHSLLDIPPLIVQVTNLRCGGMVLCTAINHCVCDGIGTSQFLHAWGHLTTKPNSDLPILPFHARHLLKPRNPPQVKCHHSAYTKAISSQVDLVKLLQSQPLVATCLTFTPSHLLHLKKQCVPSLKCTTFEALASHTWCSWVRSLNLSPTLKAKLLFSVNVRKKLTPEIPQGYYGNGFVLAYAESTVEELATANLHHGVKLVQQGKARVDDEHVRSMIDLLEDKTVKTDLSASLVISQWSKLGLEEVDFGEGKPLHMGPLTSDIYCLFLPVTGDFNAVRVMVSVPEAVVEKFLYYMKEYFWDNGGNGHVQNGYLPQQNNGLV 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0147 451 Gene3D - 13 214 IPR023213 -
Dere04g0147 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 419 - -
Dere04g0147 451 Gene3D - 223 424 IPR023213 -
Dere04g0147 451 Pfam Transferase family 18 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0147 Dere-ChrDere04 1550557 1552511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0147 14 423 Monolignol Biosynthesis Gene Families AT5G48930 30.206 2.14e-55 188