Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0137 ATGTGGGACCGTAAAATCTACGAACTTTCCGATATAGAAGTCCCTGCTAGATTTTGTCCTAAAAATATAAGAAAAACACTTTTAGTGCAGTTTGCTAACACTTACAGAGCAGCTATCAAGCAGAGATGGGGATGTGGGGAAGCCAGAGGCAGTAGTAGAAGCGGAGTGACGCACAATGTTGGTAGCCTGCAGAGCCGTAGATCAGAAGCACTGAGAACACACTGCACCTCTCTCACCTTTCGTTTTTTTCAAAATTTCCCTCTCTTGAGAGATATGGAAACCACCTCTGTCTCCAAGCTGCTACTATTTTTCTTCACGCTCTGTCTTGTGGGTTCTGAGCTGATACACTGCACAGTCTCCTACGATAGAAAGGCCATTGTCATCAATGGCAGAAGGAGGATTCTCATTTCCGGCTCCATTCACTATCCCAGAAGCTCCCCCGAAATGTGGGAAGATCTTATTCGGAAGGCCAAAGACGGAGGCCTTGATGTCATTGACACTTATGTTTTCTGGAATGTCCACGAACCCTCTCCGGGCAATTACAATTTTGAAGGGAGGTACGATCTGGTACGGTTCATTAAGACAGTGCAGAAAGTGGGGCTCTATGCTCATCTTCGCATTGGGCCTTATGTATGCGCCGAGTGGAACTTTGGAGGATTTCCAGTTTGGTTGAAGTATGTCCCTGGCATCAGCTTCAGGACGGATAATGGGCCTTTCAAGGCGGCAATGCGAGGATTCACCCAGAAGATTGTGCAGATGATGAAGAATGAAAAGCTATTTCAATCTCAGGGTGGACCAATCATTCTTTCTCAGATTGAGAACGAGTATGGGCCGGAGAGCAGAGCACTGGGGCCTGCTGGTCATGCTTACATAAATTGGGCTGCGAAAATGGCAGTTGAATTGGGTACAGGAGTCCCCTGGGTGATGTGCAAGGAAGATGACGCCCCAGATCCTGTGATTAATGCATGTAATGGTTTTTACTGCGATGAATTCTCTCCAAATAAACTCTACAAGCCTAGCCTTTGGACTGAATCTTGGAGTGGCTGGTTTACGGAATTTGGTGGCCCAATTCACCAGCGACCAGTTCAAGATCTAGCATTTGCAGTTGCTCGTTTCATACAAAGGGGTGGCTCATACGTGAATTACTACATGTATCATGGAGGAACTAACTTTGGACGCTCAGCTGGAGGCCCATTCATCACTACAAGCTATGACTATGATGCTCCTATTGATGAGTATGGTCTGATAAGGCAACCTAAATACACTCATTTGAAGGATCTTCATAGGGCTATCAAGCGATGTGAACATGCTTTAGTTTCTTCCGACCCTACTGTTACATCACTAGGAACGTTACAGCAGGCGCATGTATTCTCTTCGGGAAGTAGAACATGTGCAGCTTTTCTAGCAAACTACAATGCAAAGTCTACTGCTAGGGTGATGTTCAATAACAGACACTATGATTTGCCTCCTTGGTCCATAAGCATCCTCCCTGATTGCAGGACTGCTGTATTTAACACTGCAAAAGTGAGAGTTCAAATGTCACAGATAAAAATGCTGCCGACCAATTCAAAGTTGTTCTCATGGGGGACCTATGATGAGGATCTATCTTCTCTAGCGGGTAGTTCAAGGATGACAGCCACCGGACTCTTGGATCAGATAAACGTTACCAGAGATACAAGTGACTATCTATGGTACATAACCAGCGTTGACATAAGTCCATCAGAATCATTTCTTAAAGGAGGGCACAAACCCAGCATTAGTGTTCAGTCTGCAGGTCATGCTGTTCACGCGTTTGTTAATGGGCAGTTTTTAGGATCTGCTTTTGGAACAAGGGAACAGAGAAGTTGTACATTTAATGGCCCCGTCAACCTACATGCTGGAACTAATAAAATTGCACTTCTCAGCGTAGCTGTGGGATTACCGAATGTTGGCCTGCATTATGAAACATGGAAGACAGGGATCATAGGTCCAGTCTTGCTGTATGGTCTTGACCAGGGAAAGAAAGATTTAACGCAGCAGAAATGGTCTTACCAGATTGGGCTAAAGGGAGAGGCTATGAATTTGGTGTCTCCCATTGGAATCTCATCTGTTGAATGGATCCAAGACTCACTAGCTTCCCAAACCAAGCGGCAATTGAAATGGCATAAGGCATATTTCAACGCACCTGTGGGGAATGAACCACTGGCTTTGGACTTGGCAAGTATGGGAAAGGGTCAAGTATGGATCAACGGGCAGAGCATAGGAAGATATTGGATGGCTTATGCCAAGGGAAACTGTAATACTTGTAGCTACGAAGGCACATTCCGGCCCATTAAGTGCCAACTTGGCTGTGGACAACCCACCCAACGATGGTATCACGTTCCAAGGTCGTGGTTGAAGCCAACGAAGAACTTGATAGTAGTTTTCGAAGAATTAGGAGGGAATCCTTGGAAAATATCTTTGGTAAAGAGAACCGTACATACTCCTGCCGCCGCTAAACCCGGTTCAGAGAATTGA 2496 0.4551 MWDRKIYELSDIEVPARFCPKNIRKTLLVQFANTYRAAIKQRWGCGEARGSSRSGVTHNVGSLQSRRSEALRTHCTSLTFRFFQNFPLLRDMETTSVSKLLLFFFTLCLVGSELIHCTVSYDRKAIVINGRRRILISGSIHYPRSSPEMWEDLIRKAKDGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVRFIKTVQKVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKAAMRGFTQKIVQMMKNEKLFQSQGGPIILSQIENEYGPESRALGPAGHAYINWAAKMAVELGTGVPWVMCKEDDAPDPVINACNGFYCDEFSPNKLYKPSLWTESWSGWFTEFGGPIHQRPVQDLAFAVARFIQRGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYTHLKDLHRAIKRCEHALVSSDPTVTSLGTLQQAHVFSSGSRTCAAFLANYNAKSTARVMFNNRHYDLPPWSISILPDCRTAVFNTAKVRVQMSQIKMLPTNSKLFSWGTYDEDLSSLAGSSRMTATGLLDQINVTRDTSDYLWYITSVDISPSESFLKGGHKPSISVQSAGHAVHAFVNGQFLGSAFGTREQRSCTFNGPVNLHAGTNKIALLSVAVGLPNVGLHYETWKTGIIGPVLLYGLDQGKKDLTQQKWSYQIGLKGEAMNLVSPIGISSVEWIQDSLASQTKRQLKWHKAYFNAPVGNEPLALDLASMGKGQVWINGQSIGRYWMAYAKGNCNTCSYEGTFRPIKCQLGCGQPTQRWYHVPRSWLKPTKNLIVVFEELGGNPWKISLVKRTVHTPAAAKPGSEN 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0137 831 FunFam Beta-galactosidase 383 511 - -
Dere04g0137 831 PANTHER BETA-GALACTOSIDASE RELATED 111 821 IPR001944 GO:0004553|GO:0005975
Dere04g0137 831 SUPERFAMILY Galactose-binding domain-like 674 820 IPR008979 -
Dere04g0137 831 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 264 276 IPR019801 GO:0004553|GO:0005975
Dere04g0137 831 FunFam Beta-galactosidase 114 434 - -
Dere04g0137 831 Pfam Beta-sandwich domain in beta galactosidase 438 509 IPR041392 -
Dere04g0137 831 FunFam Beta-galactosidase 682 823 - -
Dere04g0137 831 Pfam Glycosyl hydrolases family 35 126 430 IPR031330 -
Dere04g0137 831 SUPERFAMILY (Trans)glycosidases 117 434 IPR017853 -
Dere04g0137 831 Gene3D Glycosidases 112 434 - -
Dere04g0137 831 FunFam Beta-galactosidase 537 674 - -
Dere04g0137 831 SUPERFAMILY Galactose-binding domain-like 493 664 IPR008979 -
Dere04g0137 831 Gene3D - 690 823 - -
Dere04g0137 831 PRINTS Glycosyl hydrolase family 35 signature 205 224 IPR001944 GO:0004553|GO:0005975
Dere04g0137 831 PRINTS Glycosyl hydrolase family 35 signature 737 753 IPR001944 GO:0004553|GO:0005975
Dere04g0137 831 PRINTS Glycosyl hydrolase family 35 signature 129 146 IPR001944 GO:0004553|GO:0005975
Dere04g0137 831 PRINTS Glycosyl hydrolase family 35 signature 341 356 IPR001944 GO:0004553|GO:0005975
Dere04g0137 831 PRINTS Glycosyl hydrolase family 35 signature 262 277 IPR001944 GO:0004553|GO:0005975
Dere04g0137 831 PRINTS Glycosyl hydrolase family 35 signature 398 414 IPR001944 GO:0004553|GO:0005975
Dere04g0137 831 PRINTS Glycosyl hydrolase family 35 signature 150 168 IPR001944 GO:0004553|GO:0005975
Dere04g0137 831 PRINTS Glycosyl hydrolase family 35 signature 378 393 IPR001944 GO:0004553|GO:0005975
Dere04g0137 831 PRINTS Glycosyl hydrolase family 35 signature 710 724 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0137 Dere-ChrDere04 1429739 1434471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0137 89 819 Glycoside Hydrolase AT4G36360 72.306 0.0 1153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2749 05 38208010 38212501 Dere04g0137 04 1429739 1434471 CCT
Dere04g0137 04 1429739 1434471 Dere04g0137 04 1429739 1434471 ECH