Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0130 ATGGCGGAGACAGGGTCCAAGAGAATGTGGTGCTCCATCCCTGAGCGATTTCAGCTGCATGCGGCCATGTTGGCCCTGCAGTTTGGGTATGCGGGCTTCCATGTGGTTTCAAGAGCTGCCCTCAACATGGGCATCAGCAAACTTGTTTTCCCTGTCTACCGCAACATCATCGCTTTCCTTCTCCTCCTTCCCTTTGCTTACTTCTTAGAAAAGAAGGAGAGGCCTGCGCTTACTTTGAACTTCGTCTTCCAGTTCTTTCTTCTGGCACTTGTCGGGATCACAGCGAACCAAGGATTCTACTTGCTTGGCTTGGACAACACATCCCCGACCTTTGCATCAGCGATTCAGAACTCCGTCCCAGCCATCACTTTTCTCATGGCAGCCATATTCGGGATTGAAAAAGTGAGGTGGAACCGAAAAGATGGGATTGCTAAGGTGGCTGGAACCCTATTCTGTGTAGTCGGGGCAACCGTGATCACAATATACAAGGGTCCTACCATATACAGCCCAGCACCACCTCTGCAGAACAGTACAGCATCTCTGTTTGCGTCAATGGGACTAGGAGATGCAAAGGGCAAGAGCTGGACCCTCGGGTGTATCTACCTCATTGGGCATTGCTTGACCTGGTCTGGCTGGCTGGTGATGCAAGCACCTGTGCTCAAGAAGTACCCAGCTCGCCTCTCTGTCACTTCGTACACATGTTTCTTTGGACTCATTCAGTTTCTGGTCATCGCTCTGATCTTTGAAAGAGACCCACAGGCTTGGCTTTTCCACTCTGGTGGAGAAGCTTTCACTATTTTTTACGCCGGAGTGGTGGCATCCGGAATTGCCTTCGCCGTGCAGATATGGTGCATTGACAGAGGTGGTCCTGTGTTCGTCGCCGTGTATCAACCTGTTCAGACTCTTGTCGTCGCTATCATGGCTTCCATTGCTTTAGGCGAAGAGTTCTACTTGGGCGGGATCATTGGAGCAGTATCGATCGTGGTAGGATTGTACCTAGTGTTGTGGGGCAAAAGCGAAGAGAAGAAGCTTGCAAAGGAACAACTTGCGATTGTGTCCACTCCGGAGCACAGCATCCCCAGGCCAGCAAGCCACCCCAAAACCTCACTCACTCAGCCACTCCTCCCTTCGTCCACAGAAAATGTCTGA 1149 0.5135 MAETGSKRMWCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPALTLNFVFQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAIFGIEKVRWNRKDGIAKVAGTLFCVVGATVITIYKGPTIYSPAPPLQNSTASLFASMGLGDAKGKSWTLGCIYLIGHCLTWSGWLVMQAPVLKKYPARLSVTSYTCFFGLIQFLVIALIFERDPQAWLFHSGGEAFTIFYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVSIVVGLYLVLWGKSEEKKLAKEQLAIVSTPEHSIPRPASHPKTSLTQPLLPSSTENV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0130 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 339 - -
Dere04g0130 382 Pfam EamA-like transporter family 197 335 IPR000620 GO:0016020
Dere04g0130 382 Pfam EamA-like transporter family 23 160 IPR000620 GO:0016020
Dere04g0130 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 161 - -
Dere04g0130 382 PANTHER WAT1-RELATED PROTEIN 21 347 IPR030184 GO:0016020|GO:0022857
Dere04g0130 382 MobiDBLite consensus disorder prediction 364 382 - -
Dere04g0130 382 MobiDBLite consensus disorder prediction 356 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0130 Dere-ChrDere04 1385186 1387049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0130 3 382 Nodulin-like Gene Family AT1G75500 74.742 0.0 575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2760 05 38282455 38284685 Dere04g0130 04 1385186 1387049 CCT
Dere04g0130 04 1385186 1387049 Dere04g0130 04 1385186 1387049 ECH