LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere04g0127	ATGTCCTGTATGAGACCCCACGATGTTGCCAAGACGAAACTGTTTTCATTTGAGTCGCATGTGGGAAGTCGTCGTCGGGCATGGGCATCTGAAGTTCGATTAATTCTCTATGTTCCGCCAATGCACAGCTTCAAACTAAATAAGGTTCTTGTTAAAGTTTCAACCGCACAAAGTTGTTCATTTTCTAGACAGACTAATCTTGTCGAACTGAATGTAACTGTTCAGAAGTGTGGAGTCTCAAGGACCATTTCATGTCGACCTGGCCACCAGACAATGCTGGGGAAAGGGTTCTGTCTGATCAAGCATATTCATATTTCATACGCATTACGTGGTTCTGCATTTTCCGATTTGGACATAGGGGCTGAAGATGGGCGACGGAGGTTGTTGTCCGACGATGGACCTGTTGCGGTGGGAGCCAATGCAACTGGTGCAGCTGATCATTCCAACCGAATCAGCTCACCGAACCATATCTTACCTTGGCGATCTCGGCCTCTTTCAATTCAAAGATAAAAAAGCCCATTCCAACGGACATATGCTGCTCAGATTAAAAGATGTGGGGAAATGGCACGCAAGCTACGGTTCCTAAAGGAAAAAATGGCAAAGGCTGGTGTATTACCCTCAACAAGGTCAACAAGAGATGGAGAAGTTGATCTGGACAATTTAGAGGCTGGTGAGTTTTTCTCTTCAGCACAAAAAAGCGCAGCATCTCAGCAGAAAGAATTTGAAGATATGGCAACAGATTCACCAAAGCCAATTAAGCTGGGTTTTATTACTGGCCTTGTCACTAGAGAAAAATCATTGTCCTTTGAAAGAATCTTATTTCGTGCTACTAGGGGTAACATGTTTCTGAAGCAAGCCATGATTGAACATCCTGTTCTTGATCCTTTGTCAAGAGAGAAGGTTGATAAAAATGTGTTTCTTATCTTTTATTCTGGAGAAAGAGCTAAAAGTAAAATTCAGAAAATATGTGATGCTTTTGGATCAAATCGTTATCCTTTCACTGATGACTTGAGTAAACAATTTCAGAAGATTTCAGAGGTTTCTGGAATACTTTCAGAATTAAAGACTACCATTGTTGTTGGATTGCTGCACAGGAGCACTATATTGCAGACAATTGGATATAACTACGAGTAG	1134	0.4171	MSCMRPHDVAKTKLFSFESHVGSRRRAWASEVRLILYVPPMHSFKLNKVLVKVSTAQSCSFSRQTNLVELNVTVQKCGVSRTISCRPGHQTMLGKGFCLIKHIHISYALRGSAFSDLDIGAEDGRRRLLSDDGPVAVGANATGAADHSNRISSPNHILPWRSRPLSIQRXKSPFQRTYAAQIKRCGEMARKLRFLKEKMAKAGVLPSTRSTRDGEVDLDNLEAGEFFSSAQKSAASQQKEFEDMATDSPKPIKLGFITGLVTREKSLSFERILFRATRGNMFLKQAMIEHPVLDPLSREKVDKNVFLIFYSGERAKSKIQKICDAFGSNRYPFTDDLSKQFQKISEVSGILSELKTTIVVGLLHRSTILQTIGYNYE	377

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere04g0127	377	PANTHER	VACUOLAR PROTON ATPASES	169	376	IPR002490	GO:0033179\|GO:0046961\|GO:1902600
	Dere04g0127	377	Pfam	V-type ATPase 116kDa subunit family	235	374	IPR002490	GO:0033179\|GO:0046961\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere04g0127	Dere-ChrDere04	1319248	1325355	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere04g0127	171	377	Primary Pumps ATPases(2)	AT4G39080	52.896	6.31e-80	259