Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0115 ATGACCTCTCTTCTTCTTGCTCCTTTGCTCTTCCAGCTTCTCCTTATTGCCACCGTAACATCTCCCACCGAAGCCGGCAATGGACAGTGGCAGCTCCTGCAGAATAGCATCGGCATTGTGGCCATGCACATGCAGTTACTCCACCACGACCGCGTCGTCATTTTCGACCGCACCGACTTTGGCTTTTCTAACTTATCGTTGCCTAATGGCAGATGCCGCCAAAACCCGAAAGAGATGGTCGTCAAGACCGACTGCACAGCTCACGCCGTCGAGTACGACGTCGCATCCAATACTTTCCGCCCTCTCTTTGTCCAGAGTAACGTCTGGTGTTCGTCCGGCTCCGTGGCTCCCGACGGCCGTCTGATCCAGACCGGTGGCTTCAACGACGGAGATCGTACGGTCAGGATGCTTAGTCCTTGCCCCACCTGTGACTGGGAAGAAGTGGGTGGTGAACTCGCAGCTCGTCGGTGGTACTCCACCAATCATATTCTGCCAGATGGACGCCAGATTATAATTGGTGGCAGAAGGTCATTCAACTACGAATTTTACCCTAAAACAAATGCAGCAAATAGCTACAGTCTCCCGTTTCTCGTACAGACCAACGATGCGAGTGCGGAGAACAACCTGTACCCCTTTGTTTTTCTGAACGTGGATGGCAACCTCTTCATCTTCGCTAACAATCGAGCCATCTTACTCGACTACGACAAGAACAAGGTGGTCAGGACCTACCCACAAATACCAGGTGGAGATCCAAGGTCCTATCCTAGTACAGGCTCCGCTGTGTTATTACCTTTGAAGAATTTACAAGCGCGATCTGTTGAAGCAGAGGTTCTCATTTGTGGTGGAGCCCCGAGAGGGTCTTATGAGCAGACCAACCAAGGCAAATTTCTCGCAGCCTTGAATACCTGCGCTCGTATCAAGATCACTGACTCGAACCCACAATGGGTCATGGAGACAATGCCCGGAGCTAGAGTAATGAACGACATGGTAATACTTCCTAACGGCAACGTTTTGATCATCAACGGAGCAGCCATGGGGACCGCTGGGTGGGAAGCGGGTAGGAACCCGGTGTTAAACCCGTTTCTTTATAAAACGAACAACCCACTCGGGTCTCGGTTCGATTTGCAAAACCCGTCCAATATTCCCCGGATGTACCACTCCACAGCCGTTCTCCTTCGCGATGGACGCGTGCTTGTTGCTGGCAGCAATCCTCACATATACTACAACTTCACTAACGTGTTATTTCCAACGGAATTCAGGTTGGAGGCGTTTTCACCATCGTATTTGGAGCCTGGATTCTCTAATGTGCGTCCAAAAATCGTATCTCCTGGTTCCCAATCTAAATTCAAGTATGGTCAGAAGTTCAAGCTACGGTTCCAGGTGACAGCAACATTAGCCCAGAATTTGGTATCGGTGACGATGTTGTCGCCGCCGTTTACCACTCATTCGTTCTCCATGAATCAGAGGATGTTGGTACTGGAGCCAAGCAAAGTGATAAATCTGGGAAGATCGACGTATGAAGTTGAGGTCACCACACCTCCTTCGGCTATTCTTGCACCCCCCGGCTACTATATGCTGTTCGTGGTCCATCAAGAAATTCCAAGCAACGGCGTTTGGGTGCAAATCCTATGA 1632 0.5049 MTSLLLAPLLFQLLLIATVTSPTEAGNGQWQLLQNSIGIVAMHMQLLHHDRVVIFDRTDFGFSNLSLPNGRCRQNPKEMVVKTDCTAHAVEYDVASNTFRPLFVQSNVWCSSGSVAPDGRLIQTGGFNDGDRTVRMLSPCPTCDWEEVGGELAARRWYSTNHILPDGRQIIIGGRRSFNYEFYPKTNAANSYSLPFLVQTNDASAENNLYPFVFLNVDGNLFIFANNRAILLDYDKNKVVRTYPQIPGGDPRSYPSTGSAVLLPLKNLQARSVEAEVLICGGAPRGSYEQTNQGKFLAALNTCARIKITDSNPQWVMETMPGARVMNDMVILPNGNVLIINGAAMGTAGWEAGRNPVLNPFLYKTNNPLGSRFDLQNPSNIPRMYHSTAVLLRDGRVLVAGSNPHIYYNFTNVLFPTEFRLEAFSPSYLEPGFSNVRPKIVSPGSQSKFKYGQKFKLRFQVTATLAQNLVSVTMLSPPFTTHSFSMNQRMLVLEPSKVINLGRSTYEVEVTTPPSAILAPPGYYMLFVVHQEIPSNGVWVQIL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0115 543 Gene3D Immunoglobulins 436 543 IPR013783 -
Dere04g0115 543 Pfam Glyoxal oxidase N-terminus 42 282 IPR009880 -
Dere04g0115 543 Gene3D - 24 432 IPR037293 -
Dere04g0115 543 SUPERFAMILY Galactose oxidase, central domain 89 430 IPR011043 -
Dere04g0115 543 PANTHER SECRETED PROTEIN-RELATED 11 542 - -
Dere04g0115 543 CDD E_set_GO_C 432 542 IPR015202 -
Dere04g0115 543 Pfam Galactose oxidase-like, Early set domain 437 542 IPR015202 -
Dere04g0115 543 SUPERFAMILY E set domains 433 542 IPR014756 -
Dere04g0115 543 FunFam Aldehyde oxidase GLOX 24 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0115 Dere-ChrDere04 1205978 1207609 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0115 04 1205978 1207609 Dere05g2776 05 38450179 38451813 CCT
Dere04g0115 04 1205978 1207609 Dere04g0115 04 1205978 1207609 ECH