Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere04g0108 | ATGGACACAGTGGTACTTATTATTCTCTCCTTAATTATCTGCCTCCTATTCCTCATCCATAGGACAAAAAGAACAAGAGCACATCTTCCACCAGGTCCTCCAGGTCTTCCTCTCGTCGGCAATCTACACCAGCTTCCTAACTCTGCCCCGCATCGCTATCTATGGCAACTCTCCAAGCAATACGGGCCTCTCATGTTCTTGCGTTTGGGTATCAAGCCAACCCTAGTTGTTTCCTCAGCAACAATGGCTAGAGAGGTCATGAAAACCCACGACCTCACATTTGCTAGCAGACCCTCCTTGCATGGTCAACGAAGATTGTCTTACAATGGCTTAGACTTGGCTTTCACTCCTTACAGTGAATACTGGAGACAAGCGAGAAAACTGTGTGTCCTCCACCTCTTCAGCTCTCGGCGCATCGCCTCCTTTCGTCCTATTCGAGAAGACGAGGTTATGCGAATGATTCGAAAATTATCTGAATCAGCTGCTTCTCACAGAGTAATCAACTTGAGCGAGACATTAATGTCTTCCACATGCACCTTAATCTGTAGGGTTGCCTTTGGGAAGAGGTATGAGGAGGAGCACGAAGGAAGGGAGAGAAGTAGATTTCATGGACTGATGAACGAAGCTCAGGCATTATTAGCGGAATTTTACTTCTCAGACTATATACCATGGTCGGGGTGGGTTGATAGACTCAGAGGACTACTCTGGCGGCTTGATAAAGCCTTCAAGCAGCTGGACATGTTCTACCAACATGTCATCGATGACCACATGGATTCAACCGCACGTCAAACCGACCAACAAGATATCATTGATATATTTCTTCAAATAATGGAAGGTCATTCAACCTCCTTTCATCTCACTTTGGATCACGTCAAAGCTGTGCTCATGAATATATTTATAGCAGGAACAGACACGAGCGCAGCGACAGTAGTTTGGGCTATGACCTCACTGATGAAAAATCCCAGAGTGATGAGGAAGGTACAAGATGAAATCAGAAATTTGTATGGGGAGAAAGATTTCATAAGGGAAGAGGATATGGAAAGGCTTCCTTATCTGAAAGCAGTGGTGAAGGAGACCTTGAGATTGTTCCCACCTGCGCCTCTGCTTGTGCCAAGAGAATCGATGGAAAGGTGCAACATAGAGGGGTACGAGATTCCACCCAAAACTCTAGTGTATGTGAATGCATGGGCCATAGCAAGGGACCCTGAGACCTGGGAAGATCCAGAACAATTTCATCCAGAAAGGTTCTTCAACTCCTCCATAGACTTCAAAGGCCAAGACTTTGAGCTGATTCCATTTGGAGCTGGACGCAGAATTTGTCCTGCGATGCACATGGGGGTGGTTACTGTGGAGCTTACTCTTGCTAATCTTCTTCACTCATTTAACTGGGAATTGCCTGCTGGGATTGACGAGCGAGACATTGACACAGAAGTCATACCAGGAATAACCATGCATAAGAAAAATGAGCTTTGCCTAGTTGCCAAGAGCCACACAACATAG | 1500 | 0.4587 | MDTVVLIILSLIICLLFLIHRTKRTRAHLPPGPPGLPLVGNLHQLPNSAPHRYLWQLSKQYGPLMFLRLGIKPTLVVSSATMAREVMKTHDLTFASRPSLHGQRRLSYNGLDLAFTPYSEYWRQARKLCVLHLFSSRRIASFRPIREDEVMRMIRKLSESAASHRVINLSETLMSSTCTLICRVAFGKRYEEEHEGRERSRFHGLMNEAQALLAEFYFSDYIPWSGWVDRLRGLLWRLDKAFKQLDMFYQHVIDDHMDSTARQTDQQDIIDIFLQIMEGHSTSFHLTLDHVKAVLMNIFIAGTDTSAATVVWAMTSLMKNPRVMRKVQDEIRNLYGEKDFIREEDMERLPYLKAVVKETLRLFPPAPLLVPRESMERCNIEGYEIPPKTLVYVNAWAIARDPETWEDPEQFHPERFFNSSIDFKGQDFELIPFGAGRRICPAMHMGVVTVELTLANLLHSFNWELPAGIDERDIDTEVIPGITMHKKNELCLVAKSHTT | 499 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere04g0108 | 499 | Coils | Coil | 324 | 344 | - | - | |
| Dere04g0108 | 499 | Pfam | Cytochrome P450 | 30 | 488 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere04g0108 | 499 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 433 | 442 | IPR017972 | GO:0005506|GO:0016705 | |
| Dere04g0108 | 499 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere04g0108 | 499 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere04g0108 | 499 | PRINTS | P450 superfamily signature | 431 | 440 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere04g0108 | 499 | SUPERFAMILY | Cytochrome P450 | 30 | 494 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere04g0108 | 499 | CDD | CYP71-like | 60 | 490 | - | - | |
| Dere04g0108 | 499 | PANTHER | CYTOCHROME P450 71B11-RELATED | 14 | 495 | - | - | |
| Dere04g0108 | 499 | FunFam | Cytochrome P450 83B1 | 17 | 493 | - | - | |
| Dere04g0108 | 499 | Gene3D | Cytochrome P450 | 21 | 498 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere04g0108 | 499 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere04g0108 | 499 | PRINTS | E-class P450 group I signature | 430 | 440 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere04g0108 | 499 | PRINTS | E-class P450 group I signature | 440 | 463 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere04g0108 | 499 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere04g0108 | 499 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere04g0108 | 499 | PRINTS | E-class P450 group I signature | 176 | 194 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere04g0108 | 499 | PRINTS | E-class P450 group I signature | 353 | 371 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere04g0108 | 499 | PRINTS | E-class P450 group I signature | 58 | 77 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere04g0108 | 499 | PRINTS | E-class P450 group I signature | 82 | 103 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere04g0108 | Dere-ChrDere04 | 1120434 | 1122145 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere04g0108 | 1 | 497 | Cytochrome P450 | AT4G31500 | 46.800 | 3.39e-176 | 503 |