Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0107 ATGCGTGAATTGCACAAATCGAAAAGAGTTTCTTGGGCGTCAGATTCTGATATTCGTCAGGTTAGACTGTTCTTATCTGAGGAATCTCCTTCGCAAGTTGGGTTAATTGCCCAAGATGACCTCCAAGCAAAGACATCATTGCTGTTGCATCCTGGCGGAGGAGGCTCTGATGGCATCCTACCTCCTAGCTTTGAGGGAATTCATCCTTCAAGTCAGTTGCAGGTTAAGCTGTCCCAAATTCCTGTGATTAGATGGACTAATCCGCCTAAGATTCTGCCGAATCTCATGTGGCAAGTGGTGGCTGGGGAAGAAAGCAAAGAGGTTGAGGATCAAAATAAGAGGGACATGAGAGAGCTGGAAGCTATTTATCCTCGCACATCTTCCATCCCCCCAAACCCCTCTGTCTCAATGGATGTAGATGACTCACGTTACACTGATGATCAAACCACTTTGATACCAATAATGCCCGTGGAAGATGTGGAAGATGAAGAAGCAGCAGCAGATGTGTCATCTGATTCCTTGGCATCATTGGATGTTTCAATGGGTTCACAGCCACTTTCATTACCTTTTGGCATACCTAAGGGTTCAAACTGTCCTGCTAGTGTACAGGATGTAGAATCTGATGTAGCTGCTTCTTCTGTAGCTTTAACCGATATCATGAATAGCAGTGAGTATGGAAAATTGATTGGCCATGACTTGCTGAATAAAATTCTCAACAGGCCAGAATTGATTGAGAAGTTGATTAGAGATTACGGAACTGCTAGTAACTTGCAAGGTACACCCAATGCGAGGTCATCTCCAGAGGCTTTTCCACATCCTCCAGTTATTGTTAATCGAGCAAAAACCAGTACACCATCAGCTGCTTTTTCAGCCCGTCCTTCCGATCCTCCGCCAACTCAGGGTCAAGTGATACTTGATCCTTCTCAATCGCATCCTCCACCTGCAGTAAGTCCAGTTACTGTTTCTTCTTCTCTTGTCGGGGCTCCTCTAGCCGAGGACTTCACCTACTATAAGAGCCTGATTCAGCACCATGGAGTAGAAAGACAAGAGACTCTTTCATACTCTAGTAACTGTTACATCCAGCAGCCTGTGGCAAACCAGGAGACAGCACCCAATTCTAGATCAAGGGAACAAAAACCCAAGATAATGAAGCCTTGTATCTATTTCAACAGTTCTAGAGGATGTCGGAATGGAGCCAACTGTGCATACCAGCATGATGCAGCATTCCAGCCTCGGGGTAGTGCTGTGCTACAAAATTCAAAGAGAATGAAACTGGATAGCGAGATCAGCGGTAATTAA 1299 0.4519 MRELHKSKRVSWASDSDIRQVRLFLSEESPSQVGLIAQDDLQAKTSLLLHPGGGGSDGILPPSFEGIHPSSQLQVKLSQIPVIRWTNPPKILPNLMWQVVAGEESKEVEDQNKRDMRELEAIYPRTSSIPPNPSVSMDVDDSRYTDDQTTLIPIMPVEDVEDEEAAADVSSDSLASLDVSMGSQPLSLPFGIPKGSNCPASVQDVESDVAASSVALTDIMNSSEYGKLIGHDLLNKILNRPELIEKLIRDYGTASNLQGTPNARSSPEAFPHPPVIVNRAKTSTPSAAFSARPSDPPPTQGQVILDPSQSHPPPAVSPVTVSSSLVGAPLAEDFTYYKSLIQHHGVERQETLSYSSNCYIQQPVANQETAPNSRSREQKPKIMKPCIYFNSSRGCRNGANCAYQHDAAFQPRGSAVLQNSKRMKLDSEISGN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0107 432 ProSiteProfiles Zinc finger C3H1-type profile. 380 408 IPR000571 GO:0046872
Dere04g0107 432 MobiDBLite consensus disorder prediction 125 144 - -
Dere04g0107 432 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 280 426 - -
Dere04g0107 432 MobiDBLite consensus disorder prediction 282 307 - -
Dere04g0107 432 MobiDBLite consensus disorder prediction 282 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0107 Dere-ChrDere04 1092742 1097426 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Dere04g0107 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0107 04 1092742 1097426 Dere04g0107 04 1092742 1097426 ECH