Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0104 ATGCTGCGACGGTGGCGCGACAAGGCACGCATGTCATCGGCCAACTGCGTGCCGCCGGATGTGCCGCGGGGCCACGTGGCAGTCTGCGTCGGCAGAAACTCCAGGAGATATGTGGTGAGGGTCACCTATCTGAACCACCCATTGTTCAAGAAACTACTGAATCAAGTGGAGGAAGTGCACGGCTTCTCCACCAACCATGGACCGTTCGCCATTCCATGCGACGAAGAAATCTTTCAAGAGGTCTTGCGGCTTATTTCGCGATCCGATTTGGGCAACTCCACCCGGTTCCTAAACCTTGAGGAGTTTCACAGGGACATAGTGAAGCTCATCAGCGGTACATATCAATTGCCGCTTATCGTTTTTCCTCTTAGAAAGCAAACTGCAAAATGCCACGGCCTCGCCGGCGATGGCATCGACAACCTCCGGGGAGCGAAAGAGATTGAGTTTCTATGGTGGACGCGTTGTTCACCGACACGGCCTTTGAAGTCCCATGGGAACATACGCAGACCACTATTTTTATGCACGAAGATGAAGCCTCTAATGGTGAAACTCACCGGAGCTGTTAGGGGCGGAGCTGCAGTCACGAAGATGAAGCTTTGA 600 0.5333 MLRRWRDKARMSSANCVPPDVPRGHVAVCVGRNSRRYVVRVTYLNHPLFKKLLNQVEEVHGFSTNHGPFAIPCDEEIFQEVLRLISRSDLGNSTRFLNLEEFHRDIVKLISGTYQLPLIVFPLRKQTAKCHGLAGDGIDNLRGAKEIEFLWWTRCSPTRPLKSHGNIRRPLFLCTKMKPLMVKLTGAVRGGAAVTKMKL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0104 199 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 12 82 IPR003676 GO:0009733
Dere04g0104 199 Pfam Auxin responsive protein 10 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0104 Dere-ChrDere04 1033532 1036665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0104 1 94 Calmodulin-binding Proteins AT4G34750 50.526 1.96e-29 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0104 04 1033532 1036665 Dere04g0104 04 1033532 1036665 ECH