Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0103 ATGCATTGACGTCTAATTCCGGATATCACAGCTTACCCACCACTCCCTCTCCCTCCTCCACCCTCTCTGTCTCCCACTCTGTTTCTCTTGCTTCACATCCTCTCGTTCTTCAATCCCTCCAAGCACTACCATTGTGGCAGCACCTACTCCTCTTGCATTTTCTCTCACTTTCTCTTCACATCCCTTCTTTTGCCGATGGACCGACGGTGGCCCTGGAAGAAAAAATCATCTGATAAGGCAGTGCTTGAGAAAGCAGCTGCTGCATTGGACTCTGCTGGTGCTCCTGCTCAGGGCAATCAGGATAAGTACAAAAAGCCAAACTATGTGCAAATTTCTGTGGAGTCATATTCACATCTGACTGGTTTGGAGGACCAAGTGAAGATATGTGAGGAAAAAAATCAGGCACTGGAAGATGAGATCAAAGAATTGAATGAAAAGCTGTCTACAGCAAATTCAGAAATGACTACCAAGGAAAGCCTGGTAAAACAACATGCTAAAGTAGCTGAAGAAGCTGTCTCAGGCTGGGAAAAGGCTGAAGCAGAAGCCCTGGCGTTGAAGAATCATCTAGAATCTGTCACACTTTCAAAGCTCACTGCTGAGGATCGTGCATCACACTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACCTGAAGGAAGAGCATGAACAGAAAATACAGGAAGTTGCTCTCACCAAAACCAAGCAACTAGATAAAATTAAGGGTGAGCTTGATGCCAAGATAGTTAACTTAGAACAGGAACTTCTTAGGTCTGCTGCTGAAAATGGGGCTCTTTCAAGGTCCTTACAGGAGCGCTCTAACATGCTAATCAAAATTGGTGAAGAAAAAGCTCAGGCTGAGGCTGAAATTGAGCTTTTGAAGAGTAACATAGAATCGTGTGAAAGAGAAATCAATTCACTTAAGTATGAACTTCATGTTGTTTCTAAGGAGCTGGAAATTCGCAATGAAGAAAAAAACATGAGTATGAGGTCTGCAGAAGTTGCTAACAAGCAGCATGTGGAGGGTGTTAAAAAAATTGCTAAGTTAGAGGCTGAGTGCCAAAGATTACGAGGTCTGGTACGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAAATGAAGCTAGAAGTTGAGAATCTTGGTCGAGATTATGGAGAAACTCGATTGAGAAGGTCTCCTGTTAAGTCTGCTACTCCTCATTTGTCCCCGTTGCCTGAGTTCTCTCTAGAGAATATCCAGAAATTCCAAAAGGAGAATGAATTCCTTAAGGAGCGTATGTTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAACAGTGAATTGCAGGCCTCAAGGAGTATGTGTGCTAAAACATTGAGCAAACTTCAGAGTTTGGAAGCACAACTCCAGACAAATGACCAGCAGAAAGGATCTCCAAAATCCATCATCCAGATAACACATGAAAGTATTTATAGTCAAAATGCAAGCAATGCACCAAGCTTAACATCCATGTCTGAAGATGGAAATGATGAGGCGGCAAAATGTGCTGAGTCGTGGTCTACGTCATTAATCTCAGAGCTATCCCAATCCCCGAAAGAAAAGAAATTTGAGAAATCAAGTATATCTGAAGCCACTAACAAGTTGGAACTGATGGATGACTTTCTGGAGGTGGAGAAGTTGGCTTGTCTGTCAAATGGTTCCAATAGAGATATCTCAATTTCAATTCCTTCCAGCAATGCAACAACTGAAATTGTGACCAACAATGTATCAGAAGTGGCTTGCATTGATGGTTCCTCTGACAAGCAGAATGATTTGAATTCCCTTCAAAATCAGGAATCTTCTGGTGCGGAGTTGTCAGCAACTGATAACCAATCTGATGTTAATGGCTTGTCATTGACAGAGCTTCGATCAAGAATTTTGATGGTTTTTGAGTCCATGTCTAGGGATGCTGATATGGGGAATATCCTTGAAGACATTAAACATGTTTTGGAAGATGCGTGTGACACTTCCAACCAGCATTCTGTAAGTTGCATGCCCCAGGATGTCCATCCTTCTGATGCTACATGTGACAGGAAGATTAATCCTGAAGATGCTGGCTTAAATCTTGAAAAGGAAATCACTTCATCCCATCAAACTACAGAATATGTGCAGATAACTTCAGAGTTGGAGGCTGCAATTTCTCATATTCACAACTTTGTGTTGTTCCTAGGTAGAGAAGCAATGTCAGTTCATGACATTTCCTCTGATGGAGATGGAGTGAGGCTAAAGATAGAGAAATTCTCACACACCTTTAATGAAGTCACGTGCAACAAAGCAACTTTGCTGCAGTTTGTTCTTGATTTGTCGTATGTATTAGCTAAAGCAAGTGAATTCAGAATTAATGTCCTTGGCTACAAGGGCACAGAAACTGAAACTAATAGTCCTGATTGCATAGACAAGATTGCTTTGCCAGAAAATAAGTTAATTCAAGACAGTTCATCAGGAGAAAGATATCAAAATGGCTGTTCCCATATTCTTAATCCTTGCTCTGATCCTCAGGTACCTGATGATGGCAATTTAATCTCTCGCTATGAATCAAATGCTACATCACAACAAGTATCAATGGAGAAGTTTGAAGAATTAAAATTGGAGAAAGAGAAGATGGCAACAGATCTGTCAAGATGCACTGAAATTCTTGAAATGACAAAATCTCAATTACAAGAGACTGAGCAACTTTTGGCTGAAGTTAAATCGCAATTGGCCTCTTCTCAAAGATCTAACAGCTTGGCTGAGACACAGCTGAAATGTATGGCAGAGTCATACAGGACCCTTGAAACACATGCACAGGAGTTAGAAACTGAGCTGAATCTTCTGCGAGTTAAGACAGAAACTCTGCAGAATGAACTTCAAGATGAAAAGAGGGGTCGTGAAGATGCTTTGGTCAAGTGCAAGGAGCTAGAAGAGCAATTGCAAAGGAATGAGAGCTCAGCAGCTGATAATGACCTCAAGACTCAGGAGAGAGATTTGGCAGCTGCAGCGGAAAAGCTAGCTGAGTGTCAGGAAACCATATATCTTCTTGGCAAGCAGTTAAGAACTCTACGCCCTCAAACAGAGCAAAATGGATCTTCGTACGGTGAGAGAAGTCCAAAGGTTGATGGGTTTCCAGAGGAGGAGCCTACTACTAGTAACCCTAATTTGCCAGAGTTAGATCAGGATGAGATGGACAGTGCTACTTCTGCTTTTGTGCAAAGATTGGGTCCGGAGTCCCCCTTGCATTTTTCCAGCAGCCTATGTCCATCAGATAATGAAGCAAACGTTGCTACCATACCTCCAGCAAAAAATCCAAAACACAGGCCTACCAAGTCGGCCTCCTCCTCCATTTCTTCCACCCCAACACCGGAGAAACATGCACATGCACATTCACGAGGATTTAGTAGATTCTTTTCTTCAAAAGGAAAAAGTGGTCACTGA 3453 0.422 MHXRLIPDITAYPPLPLPPPPSLSPTLFLLLHILSFFNPSKHYHCGSTYSSCIFSHFLFTSLLLPMDRRWPWKKKSSDKAVLEKAAAALDSAGAPAQGNQDKYKKPNYVQISVESYSHLTGLEDQVKICEEKNQALEDEIKELNEKLSTANSEMTTKESLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALTKTKQLDKIKGELDAKIVNLEQELLRSAAENGALSRSLQERSNMLIKIGEEKAQAEAEIELLKSNIESCEREINSLKYELHVVSKELEIRNEEKNMSMRSAEVANKQHVEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDYGETRLRRSPVKSATPHLSPLPEFSLENIQKFQKENEFLKERMLAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQLQTNDQQKGSPKSIIQITHESIYSQNASNAPSLTSMSEDGNDEAAKCAESWSTSLISELSQSPKEKKFEKSSISEATNKLELMDDFLEVEKLACLSNGSNRDISISIPSSNATTEIVTNNVSEVACIDGSSDKQNDLNSLQNQESSGAELSATDNQSDVNGLSLTELRSRILMVFESMSRDADMGNILEDIKHVLEDACDTSNQHSVSCMPQDVHPSDATCDRKINPEDAGLNLEKEITSSHQTTEYVQITSELEAAISHIHNFVLFLGREAMSVHDISSDGDGVRLKIEKFSHTFNEVTCNKATLLQFVLDLSYVLAKASEFRINVLGYKGTETETNSPDCIDKIALPENKLIQDSSSGERYQNGCSHILNPCSDPQVPDDGNLISRYESNATSQQVSMEKFEELKLEKEKMATDLSRCTEILEMTKSQLQETEQLLAEVKSQLASSQRSNSLAETQLKCMAESYRTLETHAQELETELNLLRVKTETLQNELQDEKRGREDALVKCKELEEQLQRNESSAADNDLKTQERDLAAAAEKLAECQETIYLLGKQLRTLRPQTEQNGSSYGERSPKVDGFPEEEPTTSNPNLPELDQDEMDSATSAFVQRLGPESPLHFSSSLCPSDNEANVATIPPAKNPKHRPTKSASSSISSTPTPEKHAHAHSRGFSRFFSSKGKSGH 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0103 1150 Coils Coil 893 920 - -
Dere04g0103 1150 Coils Coil 414 441 - -
Dere04g0103 1150 MobiDBLite consensus disorder prediction 1083 1097 - -
Dere04g0103 1150 Coils Coil 119 160 - -
Dere04g0103 1150 MobiDBLite consensus disorder prediction 599 625 - -
Dere04g0103 1150 SUPERFAMILY Tropomyosin 871 1041 - -
Dere04g0103 1150 MobiDBLite consensus disorder prediction 1112 1128 - -
Dere04g0103 1150 Coils Coil 243 263 - -
Dere04g0103 1150 Coils Coil 996 1016 - -
Dere04g0103 1150 MobiDBLite consensus disorder prediction 1028 1150 - -
Dere04g0103 1150 Coils Coil 928 990 - -
Dere04g0103 1150 Coils Coil 203 237 - -
Dere04g0103 1150 Coils Coil 278 319 - -
Dere04g0103 1150 Pfam Filament-like plant protein, long coiled-coil 157 1033 IPR008587 -
Dere04g0103 1150 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 66 1145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0103 Dere-ChrDere04 1019184 1025260 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2788 05 38563624 38569996 Dere04g0103 04 1019184 1025260 CCT
Dere04g0103 04 1019184 1025260 Dere04g0103 04 1019184 1025260 ECH