Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0098 ATGGCGAATCATGAAGATCAAGCTATCAAATCAAGGTTCAGGCGCATCTGCGTCTTCTGTGGTAGCAGCCCTGGCAAGAACCCCAGCTACCAGCTCGCTGCTGTTCAGCTCGCCAAACAGCTCGTGGAAAGGAAGATTGATTTAGTTTACGGAGGAGGAAGCATTGGGTTGATGGGTCTCATCTCTCAAGCCGTCTTTGATGGAGGTCGCCACGTGTTGGGAGTAATTCCCAAGACTCTCATGCCAAGAGAGATAACTGGAGAGACAGTAGGGGAAGTACGAGCCGTATCGGGGATGCACCAACGCAAGGCCGAAATGGCCAGACAAGCCGACGCTTTTATCGCCCTCCCAGGAGGTTATGGCACCCTTGAAGAGTTATTGGAAGTTATCACCTGGGCTCAGCTGGGAATCCATGAGAAACCAGTGGGCTTGTTGAACGTAGATGGGTACTACAACTCACTGCTGTCATTCATAGATAAAGCTGTGGATGAAGGATTCGTAACACCGGCTGCCCGTCACATTATTGTGTCTGCCCAAACTGCCCAAGAACTCATGTGCAAGCTTGAGGATTACGTGCCCAAGCATTGCGGTGTAGCCCCCAAGCTAAGTTGGGAGATGGAGCAACAGTTGGCTCACAGTCACACTGCCAAGTCCGATATTTATCGTTGA 669 0.5097 MANHEDQAIKSRFRRICVFCGSSPGKNPSYQLAAVQLAKQLVERKIDLVYGGGSIGLMGLISQAVFDGGRHVLGVIPKTLMPREITGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHEKPVGLLNVDGYYNSLLSFIDKAVDEGFVTPAARHIIVSAQTAQELMCKLEDYVPKHCGVAPKLSWEMEQQLAHSHTAKSDIYR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0098 222 SUPERFAMILY MCP/YpsA-like 12 191 - -
Dere04g0098 222 FunFam CASP-like protein 4 190 - -
Dere04g0098 222 NCBIfam Rossman fold protein, TIGR00730 family 15 191 IPR005269 GO:0009691|GO:0016787
Dere04g0098 222 Gene3D - 3 190 - -
Dere04g0098 222 PANTHER LOG FAMILY PROTEIN YJL055W 4 212 - -
Dere04g0098 222 Pfam Possible lysine decarboxylase 58 187 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0098 Dere-ChrDere04 965894 967686 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2791 05 38595723 38597483 Dere04g0098 04 965894 967686 CCT
Dere04g0098 04 965894 967686 Dere04g0098 04 965894 967686 ECH